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. 2021 Sep 11;49(18):10250–10264. doi: 10.1093/nar/gkab724

Table 1.

Enzymatic stability of linear and circular single-stranded oligonucleotides

Oligonucleotide Sequences (5′-3′)a 3′-Exonuclease half-lifeb Intact after 24 h (%) 5′-Exonuclease half-lifec Intact after 24 h (%)
ON-1 (dT)19•dT 1 10.0
ON-2 dT•(dT)19 1 6.5
ON-3 Q(dT)23Y 0.7 2.7 8.2 13.3
ON-4 Z(dT)23 1.2 14.8 26.8 52.5
ON-5 (linear) QaaAaCaGuGuUCUuGcUcUaUaAY 12.8 76.1 14.1 83.8
ON-6 (cyclic) ZaaAaCaGuGuUCUuGcUcUaUaA 14.5 79.1 423.0 100.0

aChemistry modifications legend: •, terminal PS linkage; dT, 2′-deoxythimidine; lower case nucleotides, 2′-OMe; upper case nucleotides in italics, 2′-F; Q, 6-azidohexyl-phosphate. For structures of Y and Z, see Scheme 1. Z denotes a cyclic oligonucleotide.

bHalf-life value determined in hours and reported relative to that of the (dT)19•dT control.

cHalf-life value was determined in hours and reported relative to that of the dT•(dT)19 control. First-order decay kinetics were assumed in calculation of half-lives. Data are representative of two independent experiments with similar results.