Table 2.
Time Point | Sample Type | Patients | Controls | Time Points | Seq. Region | Refs. |
---|---|---|---|---|---|---|
At time of diagnosis | Oral | 13 | 13 | 1 | V1-V3 | [31] |
Stool | 23+5 | 23 | 4 | V1-V3 | [8] | |
Fecal | 30 | 33 | 1 | V3-V4 | [32] | |
Stool | 58 | 23 | 1 | V1-V9 | [33] | |
During therapy | Stool | 36 | 36 | patients = 3; controls = 1 | N/A | [34] |
Stool | 199 | 0 | 4 | V1-V3 | [35] | |
Stool | 32 | 25 | 13 | V4 | [36] | |
Anal swabs | 7 | 7 | 3 | V4 | [37] | |
Stool | 51 | 19 | patients = 5; controls = 2 | V3-V4 | [38] | |
Complications during therapy | Stool | 42 (15 ALL) | 0 | 1 | V3-V4 | [12] |
Stool | 199 | 0 | 4 | V1-V3 | [35] | |
Stool | 16 | 0 | 2 | V4-V5 | [39] | |
Stool | 51 | 19 | patients = 5; controls = 2 | V3-V4 | [38] | |
Oral | 39 | 39 | 1 | V1-V3 | [40] | |
After therapy | Anal swabs | 73 | 61 | 1 | V4 | [41] |
Stool | 32 | 25 | 13 | V4 | [36] | |
Stool | 38 | 16 | 1 | V4 | [42] | |
Anal swabs | 7 | 7 | 3 | V4 | [37] |