Table 2.
Distribution of the 23,322 DML showing interactions with MSI by relation to CpG island.
| Relation of the Loci to CpG | Hypomethylated in Tumor | Hypermethylated in Tumor | # of DML | % of DML | # of Loci in Chip | % of Loci in Chip |
|---|---|---|---|---|---|---|
| Island | 533 | 7837 | 8370 | 35.89 | 150,254 | 30.94 |
| North Shelf | 309 | 309 | 618 | 2.65 | 24,844 | 5.12 |
| North Shore | 1245 | 3873 | 5118 | 21.94 | 62,870 | 12.95 |
| South Shelf | 261 | 258 | 519 | 2.23 | 22,300 | 4.59 |
| South Shore | 939 | 3137 | 4076 | 17.48 | 49,197 | 10.13 |
| Deep Sea | 1975 | 2646 | 4621 | 19.81 | 176,112 | 36.27 |
| Total | 5262 | 18,060 | 23,322 | 485,577 |