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. Author manuscript; available in PMC: 2021 Oct 12.
Published in final edited form as: Cell Metab. 2020 Sep 1;32(3):447–456.e6. doi: 10.1016/j.cmet.2020.08.004

KEY RESOURCES TABLE

REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
Rabbit polyclonal to TRP2 (Dct) abcam Cat#ab74073; RRID: AB_1524517
Alexa488-conjugated donkey anti-rabbit IgG Invitrogen Cat#R37118; RRID: AB_2556546
Rabbit monoclonal to phosphorylated-S6 (S240/244) Cell Signaling Technology Cat#5364; RRID: AB_10694233
Rabbit monoclonal to phosphorylated Akt (Ser473) Cell Signaling Technology Cat#4058; RRID: AB_331168
Rabbit monoclonal anti S6 Cell Signaling Technology Cat#2217; RRID: AB_331355
Rabbit monoclonal anti Akt Cell Signaling Technology Cat#4691; RRID: AB_915783
Rabbit monoclonal anti-GAPDH Cell Signaling Technology Cat#2118; RRID:AB_561053
Rabbit polyclonal to TRP2 (Dct) abcam Cat#ab74073; RRID: AB_1524517
Alexa488-conjugated donkey anti-rabbit IgG Invitrogen Cat#R37118; RRID: AB_2556546
Rabbit monoclonal to phosphorylated-S6 (S240/244) Cell Signaling Technology Cat#5364; RRID: AB_10694233
Rabbit monoclonal to phosphorylated Akt (Ser473) Cell Signaling Technology Cat#4058; RRID: AB_331168
Rabbit monoclonal anti S6 Cell Signaling Technology Cat#2217; RRID: AB_331355
Rabbit monoclonal anti Akt Cell Signaling Technology Cat#4691; RRID: AB_915783
Rabbit monoclonal anti-GAPDH Cell Signaling Technology Cat#2118; RRID:AB_561053
Rat monoclonal anti-mouse CD4 conjugated with Brilliant Violet 650, clone GK1.5 Biolegend Cat#100545; RRID:AB_11126142
Rat monoclonal anti-mouse CD8a conjugated with Alexa Fluor® 488, clone 53-6.7 Biolegend Cat#100723; RRID:AB_389304
Hamster monoclonal anti-mouse TCR β chain conjugated with PerCP/Cyanine5.5, cloneH57-597 Biolegend Cat#109228; RRID:AB_1575173
Rat monoclonal anti-mouse IL-10 conjugated with PE, clone JES5-16E3 Biolegend Cat#505008; RRID:AB_315362
Rat monoclonal anti-mouse TNF-α conjugated with APC, clone MP6-XT22 Biolegend Cat# 506308; RRID:AB_315429
Rat monoclonal anti-mouse Ly-6G conjugated with FITC, clone 1A8 Biolegend Cat#127606; RRID:AB_1236494
Rat monoclonal anti-mouse CD11b conjugated with APC, clone M1/70 Biolegend Cat#101212; RRID:AB_312795
Rat monoclonal anti-mouse CD62L conjugated with APC, clone MEL-14 Biolegend Cat#104412; RRID:AB_313099
Rat monoclonal anti-mouse CD45 conjugated with BV510, clone 30-F11 Biolegend Cat# 103138; RRID:AB_2563061
Rat monoclonal anti-mouse CD44 conjugated with APC-Cy7, clone IM7 Biolegend Cat#103028; RRID:AB_830785
Rat monoclonal anti-mouse CD25 conjugated with Pacific Blue, clone PC61 Biolegend Cat# 102022; RRID:AB_493643
Hamster monoclonal anti-mouse CD69 conjugated with Brilliant Violet 711, clone H1.2F3 Biolegend Cat# 104537; RRID:AB_2566120
Rat monoclonal anti-mouse F4/80 conjugated with BV510, clone BM8 Biolegend Cat#123135; RRID:AB_2562622
Hamster monoclonal anti-mouse CD11c conjugated with Pacific Blue, clone N418 Biolegend Cat#117322; RRID:AB_755988
Rat monoclonal anti-mouse MHC Class II (I-AI/E) conjugated with APC-Cy7, clone M5/114.15.2 Biolegend Cat#107602; RRID:AB_313317
Mouse monoclonal anti-mouse NK1.1 conjugated with BV650, clone PK136 Biolegend Cat#108736; RRID:AB_2563159
Chemicals, Peptides, and Recombinant Proteins
Control diet Envigo Teklad-2918
Calcium Alpha-Ketoglutarate Supplemented Diet (2%, 2918) Envigo TD.160292
Alpha-ketoglutarate Calcium Carbosynth 71686-01-6
Phorbol 12-Myristate 13-Acetate (PMA) Sigma Cat#P1585
Ionomycin Calcium Salt Sigma Cat#I0634
Brefeldin A Sigma Cat# B7651
TRIzol Reagent Invitrogen Cat#15596026
5-Bromo-4-chloro-3-indolyl β-D-galactopyranoside Sigma Cat#B4252
Critical Commercial Assays
Mouse cytokine/chemokine array 31-Plex Eve technologies MD31
Quick-RNA MiniPrep Kit Zymo 11-328
High Capacity cDNA RT kit R&D Systems Cat#4368813
ProLong Antifade kit Molecular Probes Cat#P7481
Foxp3 / Transcription Factor Staining Buffer Set eBioscience Cat#00-5523-00
Click-iT EdU Cell Proliferation Kit for Imaging, Alexa Fluor 488 dye ThermoFisher C10337
ISOLATE II RNA mini kit Bioline BIO-52073
IL-6 (human) AlphaLISA Detection Kit Perkin Elmer AL223C
Detergent compatible (DC) protein assay kit Bio-rad Cat#5000112
Deposited Data
Longitudinal Heathspan data (Female and male) This paper; Mendeley Data https://doi.org/10.17632/zr4ffhd3k9.1
R Codes for Statistical Data Analysis This paper; Mendeley Data https://doi.org/10.17632/ytstmynn4m.1
Experimental Models: Cell Lines
Human: IMR-90 fetal lung fibroblasts ATCC CCL-186
Experimental Models: Organisms/Strains
Mouse: aged C57BL/6J Female and male mice Jackson Laboratories JAX:000664
Oligonucleotides
See Table S3 N/A N/A
Software and Algorithms
OASIS 2 software Han et al. (2016) Oncotarget 11269 https://sbi.postech.ac.kr/oasis2/
Prism 8.1.0 GraphPad https://www.graphpad.com/scientific-software/prism/
R Core team software version 4.0.1 R Foundation for Statistical Computing https://cran.r-project.org
Python Software Centrum voor Wiskunde en Informatica https://www.python.org/downloads/
ImageJ software Schneider et al., 2012 https://imagej.nih.gov/ij/
CalR Mina et al., 2018 https://calrapp.org
FlowJo 10.6.1 Becton, Dickinson & Company https://www.flowjo.com/solutions/flowjo/downloads
Other
Promethion Metabolic Cage System Sable Systems International http://www.sablesys.com
31- Clinically relevant frailty phenotype Susan E. Howlett Whitehead et al., 2014 https://doi.org/10.1093/gerona/glt136
Expedata-P Data Analysis Software Sable Systems international N/A
HHS Vulnerability Disclosure