Table 1.
High fidelity of F-plasmid partition in E. coli
Loss ratea |
Copy numberb |
|||||
---|---|---|---|---|---|---|
Generation timec T (min) | pJYB249 | pDAG115 | At cell division (n) | Per cell (cn) | Average foci number per celld (fn) | Clusterization ratioe |
45 | <0.001 | 0.058 ± 0.1 | 5.16 | 3.57 | 3.13 | 0.12 |
242 | 0.001 | 0.128 ± 0.002 | 4.06 | 2.81 | 2.18 | 0.22 |
The level of plasmid F clusterization is low in fast and slow E. coli growing conditions. The clusterization level is estimated by the difference between the average number of foci and the average number of plasmids per cell.
The loss rate of the plasmids used in the microscopy assay (pJYB249) and in the determination of the plasmid copy number (pDAG115) were obtained from at least three independent measurements, except for pJYB249 grown in the presence of CSA performed in duplicate. pDAG115 is a partition defective mini-F plasmid (41) that allows for estimating the copy number at cell division (see Materials and methods).
The plasmid copy number per cell is ln2 times the copy number at cell division n (19).
The generation time (T) was estimated from measurements of culture optical densities at 600 nm.
The number of foci per cell was determined by epifluorescence microscopy.
The clusterization ratio is determined by the following formula: (cn − fn)/cn.