TABLE 2.
MAb, PFGE, and AP-PCR subtyping of clinical and environmental isolates of L. pneumophila serogroup 6
Strain no.a | Reactivity against MAb:
|
PFGE type after digestion withb:
|
AP-PCR type with primer:
|
Combined type codec | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
9/2 | 4/5d | 18/2d | 54/2d | SfiI | NotI | AscI | AP5 | AP12 | CD1 | 1247 | ||
1 | + | + | − | + | A | NC | F | a | e | g | j | I |
2 | + | − | − | − | CIII | D | G | c | e | i | l | IIII |
3 | + | − | − | − | CI | D | G | c | e | i | l | IIII |
4 | + | + | − | + | A | NC | F | a | e | g | j | l |
5 | + | + | − | + | B | E | H | b | f | h | k | II |
6 | + | + | − | + | B | E | H | b | f | h | k | II |
7 | + | + | − | + | B | E | H | b | f | h | k | II |
8 | + | + | − | + | B | E | H | b | f | h | k | II |
9 | + | + | − | + | B | E | H | b | f | h | k | II |
10 | + | − | − | − | CI | D | G | c | e | i | l | IIII |
11 | + | − | − | − | CV | D | G | d | e | i | l | IIIII |
12 | + | − | − | − | CI | D | G | c | e | i | l | IIII |
13 | + | − | − | − | CV | D | G | d | e | i | l | IIIII |
14 | + | − | − | − | CII | D | G | c | e | i | l | IIII |
15 | + | − | − | − | CIV | D | G | d | e | i | l | IIIII |
16 | + | + | − | + | A | NC | F | a | e | g | j | I |
17 | + | + | − | + | A | NC | F | a | e | g | j | I |
18 | + | − | − | − | CIV | D | G | d | e | i | l | IIIII |
19 | + | − | − | − | CII | D | G | c | e | i | l | IIII |
Chicago 2 | + | + | − | + | ||||||||
Dresden | + | − | − | − |
Strains were numbered as in Table 1.
Indistinguishable patterns are indicated with the same letter code. Minor differences (<20%) within a single PFGE type are indicated by superscript roman numerals; NC, genomic DNA is not cut by the enzyme.
Obtained by combining MAb, PFGE, and AP-PCR types; strains with >80% and 90% similarities at the macrorestriction and AP-PCR levels, respectively, were considered to belong to a single type. Superscript roman numerals indicate minor differences within a single type.
MAbs that recognize monoclonal subgroups of serogroup 6.