Table 1.
Characteristics of JE7A12T compared with members of the genus Ruminococcus
Fermentation data for R. champanellensis and R. gauvereauii were taken from Chassard et al. [15] and Domingo et al. [42], respectively. Fermentation data for all other species were taken from Ezaki [3]. +, Positive; −, negative; sd, strain dependent; w, weak reaction; nd., no data; A, acetate; F, formate; S, succinate; *, average based on all assemblies in the NCBI database.
|
Characteristic |
JE7A12T |
|||||||||
|---|---|---|---|---|---|---|---|---|---|---|
|
Genomic DNA G+C content (mol%) |
34.6 |
44.7* |
41.0* |
49.1* |
53.3* |
46.9* |
47.6* |
42.7* |
42.7* |
41.7 |
|
Genome size (Mbp) |
2.44 |
3.71* |
2.15* |
3.10* |
2.54* |
2.70* |
4.10* |
3.50* |
2.73* |
3.00* |
|
Major fermentation product(s) |
A |
A, F |
A |
A, S |
A, S |
A, F, S |
A |
A, F |
A, F |
A, L |
|
Fermentation of: | ||||||||||
|
Arabinose |
– |
– |
– |
– |
nd |
– |
nd |
+ |
– |
– |
|
Cellobiose |
– |
+ |
– |
+ |
+ |
+ |
– |
– |
– |
– |
|
Glucose |
+ |
+ |
+ |
+ |
– |
– |
nd |
+ |
+ |
+ |
|
Lactose |
– |
+ |
– |
+ |
– |
+ |
– |
– |
+ |
+ |
|
Mannose |
– |
+ |
w/– |
– |
– |
– |
nd |
– |
w/– |
w/– |
|
Maltose |
+ |
– |
+ |
+ |
– |
– |
nd |
+ |
sd |
w |
|
Mannitol |
– |
– |
– |
– |
nd |
– |
nd |
– |
+ |
– |
|
Raffinose |
– |
– |
– |
+ |
– |
– |
– |
+ |
– |
– |