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. 2021 Oct 14;13:153. doi: 10.1186/s13073-021-00965-0

Table 1.

Characteristics of case cohorts. Benchmark cohort, 119 cases total. Validation cohort, 60 cases total. Grand total, 179 cases

Assay type Variant type Proband sex Pedigree Type
Mode of inheritance WGS WES SNV/Indel SV Male Female Single Duos Trios
Benchmark cohort
 Autosomal dominant 70 11 66 15 36 45 35 6 40
 Autosomal recessive 27 23 4 14 13 9 1 17
 X-linked dominant 6 5 1 1 5 2 4
 X-linked recessive 5 5 5 2 1 2
 Sub-totals 108 11 99 20 56 63 48 8 63
Validation cohort
 Autosomal dominant 3 34 37 10 27 15 2 20
 Autosomal recessive 1 14 15 5 10 9 6
 X-linked dominant 1 5 6 3 3 1 3 2
 X-linked recessive 2 2 2 1 1
 Sub-totals 5 55 60 0 20 40 26 5 29