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. 2021 Oct 14;21:278. doi: 10.1186/s12866-021-02314-y

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© The Author(s) 2021

Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

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Fig. 2 — Metagenomic reconstructions of community composition and representation by cultivars. A) Relative abundance plots of oral, skin and gut samples from this study; each bar is an individual sample and the top 20 most abundant species are plotted. Lesser abundance bacteria, fungi, and viruses are collectively represented by their respective kingdom. Figure S1 visualize higher taxonomic levels. The proportion of bacterial genera cultivated or identified through sequencing for each sample, B), or across samples shown by boxplot, C). Red shows the proportion of bacterial genera identified through both cultivation and metagenomics, and blue and green show the proportion of bacterial genera identified by only one method. D) The total relative abundance of the original metagenomic sample (bacteria only) that is accounted for by the genera cultivated (overlap in C)