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. 2021 Sep 7;17(10):6597–6609. doi: 10.1021/acs.jctc.1c00627

Figure 3.

Figure 3

(a) Binding geometries of citrate on top of an Au (111) surface at the atomistic level. (b) PMF profile of the adsorption of one citrate molecule on an Au (111) surface with the OPLS force field. (c) PMF profile of the adsorption of one citrate molecule on an Au NP (diameter of ∼2.5 nm) with the Martini M2 model as a function of the distance from the NP COM. In both cases, the shaded area is the error on the PMF as calculated from the bootstrapping of trajectories.