TABLE 1.
Summary of GWAS analysis for stem rust resistance including number of SNPs, range of p value, range of R 2, and range of allele effect.
| Chromosome | Total no. of SNPs | –10log p value | PhenotypicVariation (R 2) | Allele effect range | |||
|---|---|---|---|---|---|---|---|
| Min | Max | Min | Max | Min | Max | ||
| 1B | 4 | 5.5642E-06 | 0.00038525 | 6.04 | 12.75 | –2.15 (A and C) | –1.42 (T) |
| 2A | 59 | 3.086E-09 | 2.357E-06 | 13.66 | 25.61 | –2.84 (G) | –2.09 (A) |
| 2B | 1 | 2.357E-06 | 2.357E-06 | 2.357E-06 | |||
| 7B | 8 | 3.175E-05 | 0.0003562 | 11.41 | 12.74 | –1.90 (C) | –1.79 (T) |
| UN | 12 | 8.5299E-09 | 0.000065646 | 9.55 | 22.74 | –2.76 (T) | –1.95 (T) |