Fig. 6.

C3D colocalizes with DNase I hypersensitive sites and several transcription factor-binding sites. A A genome browser shot including tracks for C3D, NPD, DNase-seq (DNase I hypersensitive sites, DHS), ATAC-seq, ChIP-seq for CTCF, and MNase-Seq. Data sources are from the present study (C3D and NPD), ATAC-seq of GM12878 cells [31], and ENCODE project (DHSs, CTCF, and MNase) [33]. B Aggregation plots for the read coverage of DNase-seq, ATAC-seq, and CTCF ChIP-seq for the C3D and NPD peaks. C Venn diagrams showing the overlap of C3D peaks with DHS, ATAC-Seq peaks, and CTCF binding sites