Figure 6.

Correlation between d‐scores of allele‐specific expressed genes and (a) transcription start site (TSS)‐overlapping ATAC‐seq peaks, (b) upstream intergenic ATAC‐seq peaks [candidate cis‐regulatory elements (cCREs)], (c) TSS‐overlapping H3K4me3 peaks, and (d) TSS‐overlapping H3K27ac peaks. Panel (b) includes only allele‐specific expressed genes whose promoter was closest to an upstream intergenic ATAC‐seq peak. For each panel, P‐values were calculated between y‐axis values of groups contained in ellipses using a one‐tailed, independent two‐sample Wilcoxon test. The horizontal line in each plot marks a chromatin feature d‐score of zero.