Table 1.
Contributing factors to G‐quadruplex stability and their typical impact.
Parameter |
Impact on structure and stability |
---|---|
loop length |
with longer loops decrease in stability for parallel quadruplexes but also growing preference for the formation of non‐parallel topologies |
|
|
loop composition |
destabilizing effect of adenosine in 1‐nt loops or in the 5‘‐position of short loops when compared to T and C residues |
|
|
loop length distribution |
two 1‐nt loops but also a 1‐nt central loop favor parallel topologies |
|
|
cation |
sodium ions confer less stability than potassium ions and promote formation of non‐parallel topologies |
|
|
molecular crowding |
enhanced stability and a tendency of promoting transition into a parallel topology |