Table 2.

ISAG cat comparison test 2019 summary

Labcode	Blank	Consensus genotypes	Errors	Relative genotyping accuracy	Absolute genotyping accuracy	Genotyping platform
Four laboratories	3	2357	0	100	99.87	Illumina 1 , 2
One laboratory	3	2356	1	99.96	99.83	Illumina 1
One laboratory	4	2356	0	100.00	99.83	Illumina 3
One laboratory	7	2353	0	100.00	99.7	Illumina 4
One laboratory	23	2337	0	100.00	99.03	Illumina 4
One laboratory	61	2293	6	99.74	97.16	MassArraym
One laboratory	136	2203	21	99.06	93.35	Ion S5 XL GBS
One laboratory	190	2127	43	98.02	90.13	Ion S5 XL GBS
One laboratory	214	2121	25	98.84	89.87	Ion S5 XL GBS

¹ Same array design.

² Independent Illumina array design.

³ Independent Illumina array design.

⁴ Unknown array design.