TABLE 5.
Median percent amino acid identities of alleles able to establish coinfection and superinfection
| Locus | Before seroconversion (coinfection) |
After seroconversion (superinfection) |
||||
|---|---|---|---|---|---|---|
| Most divergent allele(s)a | Least divergent allele(s)b | Range of median % identitiesc | Most divergent allele(s)d | Least divergent allele(s)e | Range of median % identitiesf | |
| Omp5 | 5-13, 5-9 | 5-1 | 97.2–98.3 | 5-3, 5-5 | 5-6 | 78.7–98.9 |
| Omp9 | 9-40 | 9-1, 9-6 | 71.3–97.1 | 9-3 | 9-30 | 72.4–98.7 |
| Omp12 | 12-4 | 12-2 | 96.0–99.0 | 12-39 | 12-29 | 98.0–99.0 |
| Omp13 | 13-2 | 13-45 | 71.2–95.4 | 13-43, 13-24 | 13-1, 13-14 | 88.9–95.4 |
| Omp14 | 14-45 | 14-1, 14-9 | 77.4–92.5 | 14-3 | 14-10, 14-14 | 78.5–92.5 |
a
The most divergent allele from each locus that is able to establish coinfection but not superinfection.
b
The least divergent allele from each locus that is able to establish coinfection but not superinfection.
c
The median percent identity of pairwise comparisons of the most and least divergent alleles able to establish coinfection but not superinfection.
d
The most divergent allele from each locus that is able to establish superinfection.
e
The least divergent allele from each locus that is able to establish superinfection.
f
The median percent identity of pairwise comparisons of the most and least divergent alleles able to establish superinfection.