Table 2. Oligonucleotide primers used for the detection of influenza viruses (H5 and H9), NDV, and IBV by RT-PCR assay.
| Target gene fragment | Primer | Sequence (5′-3′) | Amplicon size (base pair) | Reference |
|---|---|---|---|---|
| H9 | H9-F | ATCGGCTGTTAATGGAATGTGTT | 221 | [13] |
| H9-R | TGGGCGTCTTGAATAGGGTAA | |||
| N2 | N2-F | CTCCAATAGACCCGTACTAT | 460 | [14] |
| N2-R | CCTGAAGTCCCACAAAATAC | |||
| H5 | H5-F | ACAAAGCTCTATCAAAACCCAAC | 499 | [13] |
| H5-R | TACCCATACCAACCATCTACCAT | |||
| ND | ND-F | TGGAGCCAAACCGCGCACCTGCGG | 766 | [15] |
| ND-R | GAGGATGTTGGCAGCAT | |||
| IB | IB-F | GCTTTT GAG CCT AGC GTT | 149 | [16] |
| IB-R | GCCATGTTGTCACTGTCTATT | |||
| HA | HA9-F | CAAGATGGAAGTAGTATCACT | 1,683 | [10] |
| HA9-R | TTGCCAATTATATACAAATGT |