Table 1.
Species | Strains | Habitat | Accession number | Size(bp) | A + T(%) | PCGs/rRNAs | rps2 | rrn5 | tRNA | Introns | Start codon of atp8 | Reference |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Skeletonema marinoi | CNS00100 | Marine | MW438984 | 38,773 | 70.3 | 34/2 | + | – | 25 | 0 | GTG | This study |
Skeletonema marinoi | JK029 | Marine | NC_028615 | 38,515 | 70.3 | 34/2 | + | – | 25 | 0 | GTG | [45] |
Skeletonema tropicum | CNS00166 | Marine | MW438983 | 37,543 | 70.6 | 34/2 | + | – | 25 | 0 | ATA | This study |
Skeletonema costatum | CNS00243 | Marine | MW438982 | 40,676 | 71.5 | 34/2 | + | – | 26 | 0 | TTA | This study |
Skeletonema costatum | CNS00303 | Marine | MW438981 | 40,675 | 71.5 | 34/2 | + | – | 26 | 0 | TTA | This study |
Skeletonema pseudocostatum | CNS00342 | Marine | MW438980 | 36,199 | 70.6 | 34/2 | + | – | 25 | 0 | ATA | This study |
Skeletonema grevillei | CNS00438 | Marine | MW438979 | 36,336 | 70.8 | 34/2 | + | – | 25 | 0 | TTA | This study |
Thalassiosira pseudonana | Marine | NC_007405 | 43,827 | 69.9 | 34/2 | + | – | 25 | 1 | TTA | [47] | |
Thalassiosira profunda | CNS00050 | Marine | MW013551 | 40,470 | 69.0 | 34/2 | + | – | 25 | 0 | ATT | [48] |
Odontella regia | CNS00380 | Marine | MW018491 | 37,617 | 73.4 | 34/2 | – | + | 24 | 0 | ATG | [43] |
Lithodesmium undulatum | CNS00316 | Marine | MW023083 | 37,057 | 75.3 | 34/2 | – | + | 25 | 0 | ATT | [43] |
Toxarium undulatum | ECT3802 | Marine | NC_037988 | 40,429 | 69.9 | 34/2 | + | – | 26 | 0 | ATG | [49] |
The core genes included 34 PCGs (atp6, 8, 9; cob; cox1, 2, 3; nad1–7, 4 L, 9, 11; rpl2, 5, 6, 14, 16; rps 3, 4, 7, 8, 10, 11, 12, 13, 14, 19; and tatA, tatC) and two rRNAs