Table 1.
Data set | IGHV gene and upstream sequence | IGHJ6 read distribution | |
---|---|---|---|
IGHJ6*02 | IGHJ6*03 | ||
ERR2567266 | IGHV4-4*02-C | 58 | 0 |
IGHV4-4*07-A | 1 | 107 | |
ERR2567189 | IGHV4-4*02-F | 0 | 24 |
IGHV4-4*07-E | 37 | 0 | |
ERR2567200 | IGHV4-4*02-C | 0 | 46 |
IGHV4-4*07-B | 48 | 0 | |
ERR2567230 | IGHV4-4*02-A | 0 | 38 |
IGHV4-4*07-D | 72 | 0 | |
ERR2567192 | IGHV4-4*02-C | 16 | 0 |
IGHV4-4*02-A | 0 | 17 | |
ERR2567204 | IGHV4-4*02-C | 74 | 0 |
IGHV4-4*02-D | 0 | 75 | |
ERR2567246 | IGHV4-4*02-F | 0 | 65 |
IGHV4-4*02-C | 36 | 0 | |
ERR2567254 | IGHV4-4*02-C | 55 | 0 |
IGHV4-4*02-F | 0 | 42 | |
ERR2567261 | IGHV4-4*02-C | 99 | 0 |
IGHV4-4*02-F | 0 | 78 | |
ERR2567271 | IGHV4-4*02-D | 51 | 0 |
IGHV4-4*02-F | 0 | 5 | |
ERR2567274 | IGHV4-4*02-E | 24 | 0 |
IGHV4-4*02-C | 0 | 21 | |
ERR2567187 | IGHV4-4*02-C | 65 | 0 |
IGHV4-4*01 | – | – | |
ERR2567201 | IGHV4-4*07-E | 27 | 0 |
IGHV4-4*07-D | 0 | 35 | |
ERR2567263 | IGHV4-4*07-F | 0 | 94 |
IGHV4-4*07-C | 84 | 1 |
The sequence counts of 5’UTR-leader sequences of alleles of IGHV4-4 associated to different alleles of IGHJ6 in rearranged sequences. Haplotyping data for other 5’UTR-leader sequences are available in Supplementary Table 2 .