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. 2020 Nov 24;22(4):bbaa299. doi: 10.1093/bib/bbaa299

Table 2.

Performance comparison of the attention model and Depicter on the validation datasets

Species Types Model Sn (%) Sp (%) Pre (%) Acc (%) MCC F1 score
H. sapiens TATA Attention 96.75 92.17 91.54 94.31 0.8873 0.9407
Depicter 96.60 98.47 98.46 97.53 0.9508 0.9752
Non-TATA Attention 85.47 79.07 77.53 82.00 0.6431 0.8131
Depicter 88.61 89.14 89.46 88.87 0.7774 0.8903
TATA and non-TATA Attention 78.63 82.54 83.81 80.45 0.6102 0.8114
Depicter 88.22 89.95 90.25 89.06 0.7814 0.8922
M. musculus TATA Attention 98.56 97.11 97.15 97.83 0.9568 0.9785
Depicter 99.29 99.63 99.64 99.46 0.9892 0.9947
Non-TATA Attention 99.41 96.74 96.70 98.05 0.9613 0.9804
Depicter 99.20 97.13 97.12 98.15 0.9633 0.9815
TATA and non-TATA Attention 99.15 97.83 97.78 98.48 0.9697 0.9846
Depicter 98.38 98.17 98.15 98.27 0.9654 0.9826
D. melanogaster TATA Attention 92.21 96.85 96.98 94.42 0.8896 0.9454
Depicter 93.17 100.00 100.00 96.35 0.9295 0.9647
Non-TATA Attention 90.33 89.75 89.16 90.03 0.8005 0.8974
Depicter 94.10 91.12 90.37 92.52 0.8509 0.9220
TATA and non-TATA Attention 89.58 88.98 88.30 89.27 0.7853 0.8893
Depicter 92.09 91.42 90.90 91.74 0.8348 0.9149
A. thaliana TATA Attention 96.04 85.49 84.06 90.17 0.8101 0.8965
Depicter 97.09 98.38 98.44 97.72 0.9544 0.9776
Non-TATA Attention 91.55 85.46 84.30 88.27 0.7677 0.8778
Depicter 95.00 9456 94.53 94.78 0.8956 0.9477
TATA and non-TATA Attention 91.83 87.48 86.76 89.53 0.7918 0.8922
Depicter 96.06 95.38 95.34 95.72 0.9144 0.9570

Bold value in the table represents the maximum value for each performance metric.