Table 2.
Compound | PDB code [3] | pIC50 [13] | Ligand PIE (kcal/mol) | Water network PIE (kcal/mol) | Water PIE median |
---|---|---|---|---|---|
6 | 6AUB | 7.92 | − 149.0 | − 263.3 | − 35.9 |
7 | 6BIK | 8.19 | − 184.5 | − 174.0 | − 30.1 |
7_A | 6BIK | 8.19 | − 189.2 | − 211.6 | − 28.6 |
7_B | 6BIK | 8.19 | − 186.5 | − 238.0 | − 33.8 |
8_A | 6AUA | 8.88 | − 169.9 | − 277.8 | − 36.2 |
8_B | 6AUA | 8.88 | − 169.0 | − 278.8 | − 37.2 |
9 | 6EP9 | 6.83 | − 150.3 | − 214.6 | − 37.2 |
10_A | 6BKH | 8.88 | − 200.1 | − 271.2 | − 33.9 |
10_B | 6BKH | 8.88 | − 204.0 | − 285.0 | − 34.0 |
11 | 6BKE | 8.34 | − 206.3 | − 226.3 | − 33.5 |
12 | 6BLN | 8.79 | − 164.4 | − 305.0 | − 40.7 |
13 | 6BKW | 8.30 | − 159.0 | − 235.2 | − 32.3 |
14 | 5VFI | 9.04 | − 189.9 | − 215.5 | − 34.7 |
“Water network PIE” is the total of all the water energies, whereas “Water PIE median” is the median value over the individual water molecules. Median was used as it gives a more appropriate idea of the data distribution. The water molecule #6 in the 6BIK complex has been either removed (compound 7) or represented in two different positions (compounds 7A and 7B). In complex 6AUA, compound 8 is reported in two possible conformations (compounds 8A and 8B). In complex 6BKH, Ser538 can adopt two possible side chain conformations (compounds 10A and 10B, Fig. SI3)