TABLE 3.
Network properties | Bulk soil | Rhizosphere soil | Root endosphere | Stem endosphere | Leaf endosphere | Flower endosphere | |
Bacteria | Number of nodes | 1,006 | 1,046 | 993 | 781 | 872 | 731 |
Number of edges | 9,304 | 10,255 | 13,480 | 10,993 | 8,908 | 6,602 | |
Positive edges | 9,218 | 9,963 | 13,431 | 10,910 | 7,494 | 6,516 | |
Negative edges | 86 | 292 | 83 | 49 | 1,414 | 86 | |
Modularity | 0.83 | 0.78 | 0.63 | 0.80 | 0.80 | 0.83 | |
Number of communities | 72 | 63 | 53 | 45 | 88 | 66 | |
Network diameter | 11 | 15 | 13 | 10 | 10 | 13 | |
Average path length | 4.018 | 4.18 | 3.31 | 3.68 | 3.85 | 3.92 | |
Average degree | 18.50 | 19.61 | 30.08 | 28.90 | 20.43 | 16.91 | |
Average clustering coefficient | 0.64 | 0.60 | 0.74 | 0.70 | 0.68 | 0.66 | |
Density | 0.018 | 0.019 | 0.041 | 0.031 | 0.023 | 0.022 | |
Total triangles | 54,594 | 69,969 | 128,440 | 133,388 | 114,124 | 39,763 | |
Fungi | Number of nodes | 160 | 159 | 216 | 230 | 189 | 117 |
Number of edges | 384 | 340 | 1,670 | 1,102 | 546 | 336 | |
Positive edges | 335 | 299 | 1,664 | 1,089 | 522 | 365 | |
Negative edges | 49 | 41 | 6 | 13 | 24 | 1 | |
Modularity | 0.80 | 0.75 | 0.41 | 0.77 | 0.85 | 0.86 | |
Number of communities | 24 | 30 | 30 | 32 | 27 | 23 | |
Network diameter | 12 | 13 | 12 | 9 | 14 | 4 | |
Average path length | 3.94 | 4.18 | 1.78 | 2.32 | 4.28 | 1.21 | |
Average degree | 5.80 | 6.28 | 15.46 | 9.58 | 6.26 | 5.78 | |
Average clustering coefficient | 0.72 | 0.75 | 0.88 | 0.86 | 0.71 | 0.72 | |
Density | 0.03 | 0.03 | 0.07 | 0.04 | 0.03 | 0.05 | |
Total triangles | 564 | 400 | 21,599 | 5,941 | 1,137 | 957 |