Surviving persister cells in venetoclax-treated patients with CLL
are enriched for leukemic B cells displaying functional and
molecular properties of multidrug resistance. (A) Schema of
the studied patients with CLL (supplemental Table 4) with timing of
sample collections taken before and during venetoclax treatment. (B-C)
PBMCs of patients with CLL isolated prior to or during treatment with
venetoclax were analyzed for multidrug resistance in ATA by incubating
ex vivo with inhibitors of Bcl-2 (venetoclax; 25, 50, 100, or 200 nM),
Bcl-xL (A1155463; 8, 16, 32, or 64 µM), or Mcl-1 (S63845; 2.05,
3.07, 4.6, or 6.9 µM) for 3 hours without agonists. (B)
Representative flow images showing caspase-9 cleavage in CLL (viability
dye−/CD5+/CD19+)
cells following ex vivo incubation with venetoclax (200 nM), A1155463
(64 μM), or S63845 (6.9 μM) of a patient PBMC (patient 71)
taken prior to or at 3 and 27 days of treatment with venetoclax. (C)
Percentage CLL cells positive for cleaved caspase-9 following ex vivo
incubation with venetoclax, A1155463, or S63845 of multiple PBMCs of
patients with CLL (N = 5) taken prior to or during treatment with
venetoclax, as shown in panel A. Data are presented after subtracting
spontaneous apoptosis values from DMSO treatment controls. (D) The
expression of antiapoptotic proteins in PBMCs of patients with CLL (N
= 5) taken prior to or during treatment with venetoclax was
analyzed by FCM. FCS files were generated from pregated CLL (viability
dye−/CD5+/CD19+)
cells, and cell clusters expressing different levels of antiapoptotic
proteins in before and during therapy samples were identified using an
unsupervised clustering analysis as described in Figure 1C. A heatmap was generated based on GMFLI
values to show expression of various antiapoptotic proteins in different
clusters (left). Clusters were visualized using a bubble graph in which
every bubble represents 1 cluster and the area of the bubble (size) is
proportional to the mean percentage of cells in that cluster (middle). A
table showing mean percentage cells in every cluster in samples taken
before and during venetoclax treatment (right). The mean percentage of
cells in a cluster was determined by calculating the average for that
cluster across patients analyzed (N = 5). Statistical
significance was determined by ANOVA with Sidak’s post-hoc test
for multiple comparisons. *P < .05;
**P < .01;
***P < .001;
****P < .0001.
Data are presented as mean ± SD. Pt, patient; VEN,
venetoclax.