Table 4.
Summary of novel SSR identification from Vietnamese ginseng genome assembly datasets
| Misa | Krait | SciRoKo | Average | |
|---|---|---|---|---|
| Total number of sequences examined: | 9,837 | 9,837 | 9,837 | |
| Total size of examined sequences (bp): | 3,001,967,204 | 3,001,967,204 | 3,001,967,204 | |
| Total number of identified SSRs: | 694,391 | 693,587 | 693,457 | 693,812 |
| Type SSR | ||||
| Mononucleotide | 209,428 | 209,175 | 209,107 | 209,237 (30,16%) |
| Dinucleotide | 360,376 | 360,237 | 360,121 | 360,245 (51,93%) |
| Trinucleotide | 109,369 | 109,150 | 109,149 | 109,223 (15,74%) |
| Tetranucleotide | 7283 | 7188 | 7258 | 7,243 (1,04%) |
| Pentanucleotide | 4149 | 4096 | 4090 | 4,112 (0,59%) |
| Hexanucleotide | 3786 | 3741 | 3732 | 3,753 (0,54%) |
| Elapsed time | 3 min 20 s | 2 min 45 s | 3 min 5 s | |