Table 2.
Gene name | Primer sequences | |
---|---|---|
KDM1A (LSD1) | Forward | 5′-CATCATGGTGCAAGAAGAGC |
Reverse | 5′-ATGTGGGAAAGGCAGACAAG | |
KDM4B (JMJD2B) | Forward | 5′-CTGAAATGCGTGTACTGCCG |
Reverse | 5′-CGTTGCGGTTCTTGGTGATG | |
KDM4C (JMJD2C) | Forward | 5′-GCTCGATTTTCCACAGCCTC |
Reverse | 5′-CAGGGTCGGCCACATATTCA | |
KDM5B (JAR1D1B) | Forward | 5′-GTACTGTGAAGGACGCACCA |
Reverse | 5′-TAGCACCGTTTACAGGCTGG | |
KDM6B (JMJD3) | Forward | 5′-CACCCACTGTGGTCTGTTGT |
Reverse | 5′-TGTCTCCGCCTCAGTAACAG | |
HDAC1 | Forward | 5′-CGGTGCTGGACATATGAGAC |
Reverse | 5′-TGGTCCAAAGTATTCAAAGTAGTCA | |
HDAC2 | Forward | 5′-CCAGATGTTCTGGCATCCTC |
Reverse | 5′-ACAGCCCCTGTTGTCCTGT | |
HDAC3 | Forward | 5′-TGGCATTGACCCATAGCCTG |
Reverse | 5′-TGCATATTGGTGGGGCTGAC | |
HDAC4 | Forward | 5′-CGGAAGCATGTGTTTCTGCC |
Reverse | 5′-TTCTCCATGGAACGGACAGC | |
HDAC5 | Forward | 5′-TCTTGTCGAAGTCAAAGGAGC |
Reverse | 5′-GAGGGGAACTCTGGTCCAAAG | |
HDAC6 | Forward | 5′-TGGCTATTGCATGTTCAACCA |
Reverse | 5′-GTCGAAGGTGAACTGTGTTCCT | |
HDAC7 | Forward | 5′-GAACAGTCCATCCCAACAGC |
Reverse | 5′-GGCTCCTTCCGTCTCCAG | |
HIF-1α promoter | Forward | 5′-CACCCCCATCTCCTTTCTCT-3′ |
Reverse | 5′-GGGTTCCTCGAGATCCAATG-3′ | |
HIF-2α promoter | Forward | 5′-GAAGTGCGGAGGCAGGAG-3′ |
Reverse | 5′-GGCAGCCCACTTTAAAAACTC-3′ | |
GAPDH | Forward | 5′-GAAGAGCCAAGGACAGGTAC |
Reverse | 5′-CAACTTCATCCACGTTCACC |
KDM Lysine de-methylase, HDAC Histone de-acetylase, LSD1 Lysine-specific demethylase 1, JMJD Jumonji domain-containing proteins, HIF hypoxia-inducible factor, GAPDH Glyceraldehyde 3-phosphate dehydrogenase.