| REAGENT or RESOURCE | SOURCE | IDENTIFIER |
|---|---|---|
| Deposited data | ||
| NAFLD cohort 1 samples | The European Nucleotide Archive | SRP217231 https://www.ebi.ac.uk/ena/ |
| NAFLD cohort 2 samples | The European Nucleotide Archive | SRP197353 https://www.ebi.ac.uk/ena/ |
| NAFLD cohort 3 samples | ArrayExpress Archive | E-MTAB-9815https://www.ebi.ac.uk/arrayexpress/ |
| Mouse NAFLD model | This paper | GSE184019https://www.ncbi.nlm.nih.gov/geo/ |
| Experimental models: Organisms/strains | ||
| C57BL/6J mice | Gothenburg, SE | NA |
| Software and algorithms | ||
| R language version 4.0.3 | https://cran.r-project.org/ | |
| Matlab language version R2020b | https://www.mathworks.com/ | |
| Cytoscape version 3.8.2 | https://cytoscape.org | |
| Python version 3.8 | Python Software Foundation | https://www.python.org |
| Kallisto | Bray et al. (2016) | https://pachterlab.github.io/kallisto/ |
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