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. 2021 Oct 21;10(42):e00835-21. doi: 10.1128/MRA.00835-21

TABLE 1.

Genome information for streptococcal endophthalmitis strains

Strain Species GenBank accession no. SRA accession no. BioProject accession no. Genome coverage (×) Genome size (bp) No. of contigs Contig N50 (bp) % GC
E619 Streptococcus oralis JAGTPY000000000 SRP334189 PRJNA723877 181 2,038,810 117 133,191 41.5
E628 S. oralis JAHCMD000000000 SRP334182 PRJNA729452 937 2,039,974 120 262,361 42.0
E636 Streptococcus salivarius JAHFVU000000000 SRP334217 PRJNA732651 303 2,176,614 218 76,560 41.0
E647 Streptococcus mitis JAHWWD000000000 SRP334218 PRJNA748383 209 1,941,891 136 82,400 40.2
E649 S. oralis JAHCME000000000 SRP334216 PRJNA729458 261 2,325,945 1,354 210,456 42.3
E651 S. mitis JAHFZD000000000 SRP334228 PRJNA732655 321 1,947,544 50 220,341 41.0
E653 Streptococcus vestibularis JAHHFR000000000 SRP334250 PRJNA732899 2,064 2,038,817 1,026 84,869 40.8
E664 S. oralis JAHHFS000000000 SRP334240 PRJNA732900 157 2,028,266 227 279,115 42.0
E665 S. oralis JAHZTX000000000 SRP334297 PRJNA726988 200 2,101,270 723 324,883 41.2
E669 Streptococcus parasanguinis JAHHFT000000000 SRP334241 PRJNA732901 424 2,266,699 126 91,101 42.7
E681 Streptococcus mutans JAHHFU000000000 SRP334249 PRJNA732902 1,223 2,003,248 107 193,826 39.3
E684 S. oralis JAHMJX000000000 SRP334304 PRJNA735205 227 1,971,377 45 159,424 42.5
E689 S. mitis JAHMJY000000000 SRP334303 PRJNA735211 162 1,894,874 68 78,763 41.4
E697 S. oralis JAGXBX000000000 SRP334296 PRJNA726981 245 2,013,862 119 301,460 42.2
E707 S. oralis JAHMJZ000000000 SRP334299 PRJNA735246 202 2,167,014 76 88,806 43.3
E728 S. oralis JAHCMC000000000 SRP334288 PRJNA729432 1,024 1,904,690 97 269,052 41.5
E734 S. oralis JAHMSA000000000 SRP334285 PRJNA735250 830 2,239,686 790 442,692 42.1
11-4097 Streptococcus sp.a JAGSFX000000000 SRP334287 PRJNA721732 424 2,259,404 667 119,508 41.6
11-6117 Streptococcus constellatus JAHWWC000000000 SRP334292 PRJNA748382 213 1,869,421 70 244,417 38.3
14-4065 Streptococcus gordonii JAHZSL000000000 SRP334293 PRJNA728738 179 2,249,747 73 292,239 40.5
14-4881 S. mitis JAHFZC000000000 SRP334290 PRJNA732646 146 2,037,084 383 161,933 41.7
a

Closest match for 11-4097: S. mitis (67% match to the type genome used by NCBI).