TABLE 1.
Statistics of raw reads and quality controlled reads
Type of reads | No. of sequences | Sum of length (bp) | Minimum length (bp) | Avg length (bp) | Maximum length (bp) | Nanopore N50 (bp) |
---|---|---|---|---|---|---|
Illumina_raw | 795,261 | 122,023,362 | 35 | 153.4 | 156 | |
Illumina_trimmed | 780,932 | 116,710,771 | 31 | 149.5 | 152 | |
Nanopore_raw | 52,944 | 116,384,428 | 1 | 2,198.3 | 28,359 | 6,084 |
Nanopore_trimmed | 21,908 | 59,325,730 | 1,000 | 2,707.9 | 27,925 | 6,673 |