Table 1.
Basic region |
Leucine zipper |
Transactivation domaina |
||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MDV strain | Country | Accession number | 71 | 77 | 80 | 110 | 114 | 115 | 119 | 150 | 168 | -/176 | 176/217b | 177/218 | 180/221 | 285/326 |
Kgw-c2 | Japan | LC385874 | A | E | Y | C | C | A | C | H | S | - | A | P | A | T |
CVI988(S-Meq) | Netherlands | AY243338 | A | E | D | C | R | V | C | H | S | - | P | P | A | I |
855/17 | Italy | MK139678 | A | E | Y | S | R | V | C | H | S | - | P | S | T | T |
MDV/2/SA | Saudi Arabia | KJ949618 | A | E | Y | S | R | V | C | P | S | - | P | P | A | T |
Iraq3A | Iraq | KC243262 | A | E | Y | C | R | V | R | H | P | - | A | P | A | T |
Iraq10A | Iraq | KC243264 | S | E | D | C | R | V | C | H | P | - | A | P | A | T |
Iraq6F | Iraq | KC243263 | S | E | D | C | R | V | C | H | S | - | A | P | A | T |
Nr-c1c | Japan | LC385871 | A | E | Y | C | R | A | C | H | S | S | A | P | A | T |
S-Meq has 41 aa-deletions in the transactivation domain.
Interruptions at position 2 of the direct proline repeats.
Meq amino acid sequence from a Japanese strain is indicated and its sequence is the most frequent among the field strains in Japan (Murata et al., 2013).