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. 2021 Oct 19;9:e12018. doi: 10.7717/peerj.12018

Table 1. Sequence Retrieval and PSI-BLAST result for Genes for DNA-A CLCuKoV-Bur, βC1 gene of CLCuMB and DNA-A and DNA- B of ToLCNDV.

Virus Uniprot accession no. PSI- BLAST result
PDB ID Total score Query cover E value Percentage identity
CLCuKoV-Bur Rep A0A0S2MSV0 1L2M 206 31% 2e−66 78.45%
TrAP A0A0S2MST9 6DDT 24.6 48% 52.94% 52.94%
REn A0A0S2MSU6 2XF4 32.7 44% 0.1 30.16%
C4 A0A2K8HNC7 2CKF 16.2 26% 0.74 23.68%
CP A0A0S2MSU9 6F2S 394 83% 1e−140 82.79%
V2 A0A0S2MSV4 3FCX 27.7 31% 4.0 35.14%
CLCuMB βC1 A0A0K2SU38 6JWP 28.5 69% 2.6 28.05%
ToLCNDV DNA-A Rep A0A565D4R1 1L2M 208 32% 3e−67 82.76%
TrAP A7WPF3 6F12 30 39% 1.1 30.36%
REn A6PYE1 4N0H 27.7 30% 6.4 35.56%
C4 A7U6D0 3H74 30.8 55% 0.05 37.5%
CP A0A2Z2GPB3 6F2S 367 83% 7e−130 78.6%
V2 A0A3G2KQ59 1Q9J 27.7 46% 3.6 40.74%
ToLCNDV DNA-B NSP A0A2P2CKV4 5E68 30.4 8% 1.8 52.17%
MP E6N191 3N2O 32.3 23% 0.81 27.27%