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. 2021 Oct 19;9:e12343. doi: 10.7717/peerj.12343

Table 1. Estimation of nucleotide diversity (π and ϴ) and Tajima’s D in wild accessions and cultivars using the associated SNPs for various metabolites.

Compound Wild accessions Cultivars
PiPerBP ThetaPerBP TajimaD PiPerBP ThetaPerBP TajimaD
Histidine 0.44727 0.17781 2.796 0.42612 0.19064 2.42097
Arginine 0.37416 0.17781 3.07763 0.34586 0.19064 2.36865
Asparagine 0.39409 0.17781 2.99071 0.38203 0.19064 2.59433
Glutamine 0.34258 0.17781 2.52647 0.28994 0.19064 1.4843
Serine 0.39736 0.17781 2.59423 0.39127 0.19064 2.33932
Glutamic acid 0.33648 0.17781 2.23581 0.33306 0.19064 1.96538
Aspartic acid 0.41423 0.17781 2.79362 0.40269 0.19064 2.47245
Citrulline 0.41116 0.17781 3.80497 0.38377 0.19064 3.05821
Threonine 0.28987 0.17781 1.04887 0.29278 0.19064 0.94971
Glycine 0.50441 0.17781 4.4193 0.49677 0.19064 4.06485
Alanine 0.39035 0.17781 2.37438 0.40995 0.19064 2.42216
GABA 0.4673 0.17781 4.20796 0.46442 0.19064 3.89117
Proline 0.4213 0.17781 3.43089 0.39976 0.19064 2.88584
L-Ornithine 0.39879 0.17781 3.1656 0.38207 0.19064 2.68343
Cystine 0.31258 0.17802 1.72256 0.32379 0.19064 1.677
Lysine 0.35466 0.17781 1.65535 0.34738 0.19064 1.45748
Tyrosine 0.35377 0.17781 1.96577 0.33973 0.19064 1.64662
Methionine 0.43189 0.17781 3.25328 0.42781 0.19064 2.98728
Valine 0.42894 0.17781 3.10179 0.4346 0.19064 2.96847
Isoleucine 0.42913 0.17781 3.47525 0.40277 0.19064 2.87541
Leucine 0.43068 0.17781 2.82495 0.42798 0.19064 2.62141
Phenylalanine 0.30904 0.17781 1.36162 0.31859 0.19064 1.3155
Ethanolamine 0.24421 0.17781 0.78456 0.25513 0.19064 0.75187
Hydroxylysine 0.33186 0.17781 2.13023 0.29377 0.19064 1.39787
Alpha aminoadipic acid 0.25084 0.17781 1.06154 0.26251 0.19064 1.02139
Kynurenine 0.37664 0.17781 2.22127 0.37595 0.19064 2.04666
Tryptophan 0.38067 0.17781 2.5975 0.35361 0.19064 2.05263
Argininosuccinic acid 0.40357 0.17781 2.78851 0.37942 0.19064 2.29704