aDMA	ω-NG,NG-asymmetric di-methyl-arginine	mTORC1	mTOR complex 1
AKT/PKB	serine/threonine kinase	NER	nucleotide excision repair
ALS	amyotrophic lateral sclerosis	Noct	deadenylase nocturin
APA	alternative polyadenylation	pA	polyadenylation site
AS	alternative splicing	PABPN1	nuclear poly(A) binding protein
ASCC3	activating signal cointegrator 1 complex subunit 3	PABPN1	poly(A)-binding protein 1
ASO	antisense oligonucleotide	PanNEN	pancreatic neuroendocrine neoplasms
ATM	Ataxia-telangiectasia mutated	PAP	poly(A) polymerase enzyme
ATR	ataxia telangiectasia and Rad3-related protein	PAS	polyadenylation signal
BMAIL1	brain and muscle ARNT-like 1	Pc2	E3 ligase polycomb protein
C/P	cleavage and polyadenylation	PDAC	pancreatic ductal adenocarcinoma
CAMKIV	CA2+-calmodulin kinase IV	PER	period
cAMP	cyclin adenosine monophosphate	PI3K	phosphoinositide-3-kinase
CBP	CREB-binding protein	PKC	protein kinase C
CDK1	cyclin dependent kinase 1	Pre-mRNAs	precursor mRNAs
CDS	coding sequence	PRMT1-9	arginine methyltransferases 1-9
CFIm	cleavage factor I	Prp8	pre-mRNA-processing-splicing-factor 8
cGMP	cyclin guanosinemonophosphate	PTEN	phosphatase and tensin homolog
CHK1	checkpoint kinase1	PTM	post-translational modification
CHK2	checkpoint kinase 2	R15-LOX	reticulocyte-15-lipoxygenase
CIRBP	cold-inducible RNA-binding protein	RBM20	RNA-binding motif 20 protein
CLK1-4	CDC-like kinase	RBPs	RNA-binding proteins
CLOCK	circadian locomotor output cycles kaput	RGG	arginine–glycine–glycine-rich
CPSF	cleavage and polyadenylation specificity factor	RGG	glycine/arginine rich
CRY	cryptochrome	RNAPII	RNA polymerase II
CSTF	cleavage stimulation factor	RRE	receptor-binding element
CTD	carbossi-terminal domain	RRM	RNA recognition motif
DAZAP1	DAZ-associated protein 1	SCN	superchiasmatic nucleus of the hypothalamus
DDR	DNA damage response	sDMA	ω-NG, N’G-symmetric di-methyl-arginine
DESI1/2	deSUMOylating isoptidase1/2	SF1	splicing factor 1
DNA-PK	DNA-dependent protein kinase	SH3	Src homology 3
DSE	regulatory downstream sequence elements	SIMs	SUMO-interacting motifs
EDA	extra domain A	SIRT1	stress response protein 1
ERK	extracellular signal-regulated kinase	SMA	spinal muscular atrophy
FGFR2	fibroblast growth factor receptor 2	SMAR1	scaffold/matrix associated region binding protein1
FN	fibronectin	SMN	survival motor neuron protein
FUS	fused in sarcoma	snRNA	small nuclear RNA
FXR2P	fragile X-related protein 2	snRNPs	small nuclear ribonucleoprotein particles
GCN5	general control non-repressed 5 protein	SR	serine–arginine-rich proteins
H3K36me3	trimethylation of lysine 36 of the histone 3	SRPK2	SR protein kinase 2
HAT	histone acetyltransferase	SRSF1	serine and arginine rich splicing factor 1
HDACs	histone deacetylate enzymes	ssDNA	Single-stranded DNA
hnRNPs	heterogeneous nuclear ribonucleoproteins	STAGA	SAGA-like HAT complex
HSE	heat shock elements	STAR	signal transduction and activation of RNA
HSF1	heat shock transcription factor 1	TBK1-IRF3	TANK-binding kinase1-interferon regulatory factor 3
HsfA2	heat shock transcription factor A2	TRN1	transportin 1
HSPs	heat shock proteins	U2AF35	U2 Auxiliary Factor of 35 kilodaltons
HSV-1	herpes simplex virus 1	U2AF65	U2 Auxiliary Factor of 65 kilodaltons
HuR/ELAV1	Hu antigen R/embryonic lethal, abnormal vision, Drosophila homolog-like 1	UBDs	ubiquitin-binding domains
IPA	internal pA	USE	regulatory upstream sequence elements
ipRGCs	intrinsically photosensitive retinal ganglion cells	USPL1	ubiquitin-specific protease-like 1
IWS1	interacts with SUPT6H, CTD assembly factor1	UTR	untranslated region
MAPKs	Mitogen-activated protein kinases	UV	ultraviolet irradiation
MMA	ω-NG-mono-methyl-arginine	WTF9	what’s this factor 9
mTOR	target of rapamycin