Skip to main content
. 2021 Sep 30;10(10):1560. doi: 10.3390/antiox10101560
BP86 GGA functional with Becke exchange and Perdew correlation
B3PW91 Hybrid functional with Becke exchange and Perdew Wang correlation
COSMO Conductor-like Screening Model for solvation
Cys Cysteine
DFT Density Functional Theory
DHA Dehydroalanine
GAPDH Glyceraldehyde 3-phosphate dehydrogenase
GGA Generalized Gradient Approximation
GPx Glutathione Peroxidase
GTO Gaussian Type Orbital
IMPase Inositol MonoPhosphatase
OLYP GGA functional with OPTX exchange and LYP correlation
OPBE GGA functional with OPTX exchange and PBEc correlation
D3(BJ) Dispersion correction (D3) by Grimme with damping function
HOMO Highest Occupied Molecular Orbital
LUMO Lowest Unoccupied Molecular Orbital
MeCys Methyl Cysteine
MEP Molecular Electrostatic Potential
MPn Møller Plesset perturbative method of order n
MeSec Methyl Selenocysteine
NMR Nuclear Magnetic Resonance
PC Product Complex
PCM Polarizable Continuum Model
PES Potential Energy Surface
QCISD(T) Quadratic Configuration Interaction with Single Double (Triple) excitations
QM Quantum Mechanics
QZ4P uncontracted set of Slater-type orbitals of quadruple-ζ quality, augmented with four sets of polarization functions per atom
RC Reactant Complex
SAPE Solvent Assisted Proton Exchange
Sec Selenocysteine
S-GPx Sulfur mutant of glutathione peroxidase
SMD Solvation Model based on Density
STO Slater Type Orbital
Tec Tellurocysteine
Te-GPx Tellurium mutant of glutathione peroxidase
TS Transition State
TZP uncontracted set of Slater-type orbitals of triple-ζ quality, augmented with one set of polarization functions per atom
TZ2P uncontracted set of Slater-type orbitals of triple-ζ quality, augmented with two sets of polarization functions per atom
XC Exchange- Correlation
ZORA Zeroth Order Regular Approximation