TABLE 3.
Mutant | Position of the reference sequence |
SNP | Locus | Gene | Amino acid changea |
Product | Old locus tag |
Provean scoreb |
SNP domain |
---|---|---|---|---|---|---|---|---|---|
FOS1 | 1829461 | A:T>G:C | SMD_RS08765 | eno | p.D398G | Enolase | SMD_1655 | −6.77 | C-terminal TIM barrel domain |
FOS4 | 1411119 | C:G>T:A | SMD_RS06650 | gpmA | p.P212L | Phosphoglycerate mutase |
SMD_1268 | −9.88 | Histidine phosphatase superfamily |
FOS7 | 3798418 | G:C>C:G | SMD_RS17680 | gapA | p.D296G | Glyceraldehyde-3- phosphate dehydrogenase |
SMD_3406 | −3.37 | NAD binding domain |
FOS8 | 3793349 | G:C>A:T | SMD_RS17665 | pgk | p.Q50ST | Phosphoglycerate kinase |
SMD_3403 | N-terminal domain, containing the substrate binding site |
ST, stop mutation.
Provean deleterious score threshold of the changes is −2.5. Any SNP is located in a catalytic site of the corresponding enzyme.