| TF | Transcription factor |
| TrB | Trophectoderm |
| TE | Transposable Element |
| ICM | Inner cell mass |
| EPI | Epiblast |
| preEEPI | Pre-implantation early epiblast |
| preETE | Pre-implantation early trophectoderm |
| Pre-EPI | Pre-implantation epiblast |
| postE-EPI | Post-implantation early epiblast |
| postL-EPI | Post-implantation late epiblast |
| PrE | Primitive endoderm |
| ERV | Endogenous retroviruse |
| LTR | Long terminal repeat |
| hESC | Human embryonic stem cell |
| KRAB-ZFP | KRAB-containing zinc finger protein |
| rhFSH | Recombinant human follitropin alpha |
| rhCG | Recombinant human chorionic gonadotropin alpha |
| TALP | Tyrode’s albumin lactate pyruvate |
| BSA | Bovine serum albumin |
| MOR | Morula |
| DEGs | Differentially expressed genes |
| Gast1 | Gastrulating cells 1 |
| Gast2a | Gastrulating cells 2a |
| Gast2b | Gastrulating cells 2b |