Table 1.
Genetic mapping of binary phenotypic traits ‘root outer phloem anthocyanin pigmentation’ (ROPAP) and ‘root inner phloem anthocyanin pigmentation’ (RIPAP).
| Rait | Chr. | Max LOD Position † | Nearest Marker | Position of Nearest Marker (cM) | Max. LOD | 1.5 LOD Interval (nt) | Difference LOD Interval (nt) | 1.5 LOD Interval (cM) | Difference LOD Interval (cM) | % Variance Explained |
|---|---|---|---|---|---|---|---|---|---|---|
| ROPAP | 3 | 3_4002091 | 3_4002091 | 22.9 | 17.4 | 3,394,611–4,075,544 | 680,933 | 21.6–23.5 | 1.9 | 23.6 |
| ROPAP | 3 | Chr3.loc63 | 3_27356688 | 63.2 | 13.9 | 26,273,113–28,568,500 | 2,295,387 | 58.8–65.3 | 6.6 | 17.8 |
| RIPAP | 3 | 3_27356688 | 3_27356688 | 63.2 | 5.3 | 19,453,199–29,895,002 | 10,441,803 | 46.5–67.5 | 21.1 | 14.7 |
† Refers to the map position of the maximum LOD value for each trait. 1.5 LOD intervals are expressed in physical (nt) and genetic distances (cM).