Table 1.
Top ten commonly detected Campylobacter jejuni sequence types (STs) recovered from the whole genome sequence in the NCBI Pathogen Detection Database (n = 40,371) from each continent.
| Rank | North America (n = 30,504) | Europe (n = 9246) | South America (n = 191) | Oceania (n = 171) | Asia (n = 168) | Africa (n = 91) | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ST | n (%) | ST | n (%) | ST | n (%) | ST | n (%) | ST | n (%) | ST | n (%) | |
| 1 | 353 | 1602 (5.25) | 50 | 563 (6.09) | 353 | 24 (12.57) | 50 | 29 (16.96) | 2988 | 14 (8.33) | 353 | 9 (9.78) |
| 2 | 50 | 1388 (4.55) | 5136 | 416 (4.50) | 2993 | 20 (10.47) | 528 | 13 (7.60) | 22 | 8 (4.76) | 362 | 5 (5.43) |
| 3 | 48 | 1260 (4.10) | 48 | 398 (4.30) | 8741 | 15 (7.85) | 48 | 11 (6.43) | 985 | 8 (4.76) | 7784 | 5 (5.43) |
| 4 | 45 | 1236 (4.05) | 21 | 383 (4.14) | 1359 | 14 (7.33) | 567 | 7 (4.09) | 587 | 7 (4.17) | 52 | 4 (4.35) |
| 5 | 982 | 1220 (3.99) | 45 | 297 (3.21) | 475 | 12 (6.28) | 9817 | 6 (3.51) | 2140 | 6 (3.57) | 460 | 4 (4.35) |
| 6 | 8 | 1013 (3.32) | 257 | 273 (2.95) | 50 | 7 (3.66) | 2398 | 6 (3.51) | 10,086 | 5 (2.98) | 1038 | 4 (4.35) |
| 7 | 806 | 857 (2.80) | 122 | 239 (2.58) | 52 | 7 (3.66) | 658 | 5 (2.92) | 27 | 4 (2.38) | 5 | 3 (3.26) |
| 8 | 459 | 756 (2.47) | 19 | 237 (2.56) | 403 | 6 (3.14) | 257 | 5 (2.92) | 986 | 4 (2.38) | 523 | 3 (3.26) |
| 9 | 21 | 697 (2.28) | 61 | 209 (2.26) | 463 | 6 (3.14) | 190 | 5 (2.92) | 2209 | 4 (2.38) | 607 | 3 (3.26) |
| 10 | 222 | 674 (2.20) | 354 | 171 (1.85) | 883 | 4 (2.09) | 6964 | 4 (2.34) | 5 | 3 (1.79) | 1036 | 3 (3.26) |