Table 1.
The bioinformatics prediction tools used in vaccine designing.
| Tools for B-cell epitope prediction | Tools for T-helper epitope prediction | Tools for prediction of MHC Class I binders | Tools for prediction MHC Class II binders | Tools for prediction of endogenous antigen processing | Tools for prediction of Allergenicity of peptides | Tools for prediction of Antigenicity |
|---|---|---|---|---|---|---|
| ABCpred | IFNepitope | ProPred1 | Propred | CTLPred | AllerHunter | SVMTriP, |
| Bcepred | IL4pred | NetMHCcons | Consensus | NetTepi | Algpred | VaxiJen, |
| BepiPred | nHLAPred | EpiDOCK | FRED | Toxinpred | ANTIGENpro | |
| SVMTriP | MMBPred | EpiTOP | TAPPred | PREAL | ||
| COBEpro | NetCTLpan | MHC2Pred | TAPhunter | Hemolytik | ||
| EPMLR | RANKPEP | HLA DR4Pred | TAPreg | AHTPDB | ||
| Pep-3DSearch | MULTIPRED2 | Pcleavage | AllergenFP | |||
| IgPred | MARIA | NetChop | Allertop | |||
| Lbtope | ||||||
| BEpro | ||||||
| CBTOPE | ||||||
| CEP | ||||||
| PEASE | ||||||
| DiscoTope | ||||||
| Epitopia | ||||||
| SEPPA | ||||||
| BEST | ||||||
| EPCES | ||||||
| BEPro (PEPITO) | ||||||
| EpiSearch | ||||||
| MimoPro | ||||||
| MIMOX | ||||||
| Pep-3D-Search | ||||||
| PepSurf | ||||||
| ElliPro |