Table 1.
Results for the literature review, indicated as number of papers screened that related to a particular category in the table (percentage).
| Host | N | Targeted animal species | Sampling strategy * | Matrix | |||||||
| Single species | multi species | L | E | P | S | field stabilizer | feces/ anal swab | oral swab | organs | ||
| Bats | 71 | 13 (18) | 58 (82) | 55 (77) | 7 (10) | 4 (6) | 15 (21) | 39 (55) | 61 (86) | 30 (42) | 19 (27) |
| Rodents | 11 | 0 | 11 (100) | 7 (64) | 1 (9) | 1 (9) | 5 (45) | 8 (73) | 7 (64) | 4 (36) | 7 (64) |
| Other wild mammals | 12 | 5 (41) | 8 (67) | 10 (83) | 0 | 2 (17) | 2 (17) | 10 (83) | 9 (75) | 7 (58) | 4 (33) |
| Domestic mammals | 13 | 10 (77) | 3 (23) | 11 (85) | 0 | 3 (23) | 0 | 1 (7.7) | 8 (62) | 6 (46) | 2 (15) |
| Birds | 7 | 0 | 7 (100) | 7 (100) | 0 | 0 | 1 (14) | 6 (86) | 7 (100) | 4 (57) | 1 (14) |
| Total | 100 | 27 | 74 | 77 | 8 | 9 | 21 | 54 | 79 | 41 | 28 |
N = number of papers. In the section, “targeted animal species” is indicated if the study describes the targeted sampling of a single species or if more than one species is tested due to opportunistic sampling (such as trapping or netting). * Acronyms for the sampling strategies refer to live sampling (L), environmental sampling (E), passive surveillance (P), and sacrifice of animals (S).