Table 2.
List of strains and GenBank accession numbers of sequences used in this study.
| Species | Strain No. | Host/ Substratum | GenBank Accession No. | ||||
|---|---|---|---|---|---|---|---|
| ITS | LSU | RPB1 | RPB2 | TEF | |||
| Akanthomyces aculeatus | HUA 772 | Lepidoptera; Sphingidae | - | KC519370 | - | - | KC519366 |
| A. attenuates | CBS 402.78 | Leaf litter (Acer saccharum) | - | AF339565 | EF468888 | EF468935 | EF468782 |
| A. coccidioperitheciatus | NHJ 6709 | Araneae (Spider) | - | EU369042 | EU369067 | - | EU369025 |
| A. farinosa | CBS 541.81 | - | AY624180 | MF416553 | MF416655 | MF416449 | JQ425686 |
| A. tuberculatus | BCC 16819 | Lepidoptera (Adult moth) | - | GQ249987 | - | - | GQ250037 |
| A. tuberculatus | OSC 111002 | Lepidoptera | - | DQ518767 | DQ522384 | - | DQ522338 |
| Ascopolyporus polychrous | P.C. 546 | Plant | - | DQ118737 | DQ127236 | - | DQ118745 |
| A. villosus | ARSEF 6355 | Plant | - | AY886544 | DQ127241 | - | DQ118750 |
| Beauveria bassiana | ARSEF 1564 | Lepidoptera; Arctiidae | - | - | HQ880833 | HQ880905 | HQ880974 |
| B. brongniartii | ARSEF 617 | Coleoptera; Scarabaeidae | - | AB027381 | HQ880854 | HQ880926 | HQ880991 |
| B. brongniartii | BCC 16585 | Coleoptera (Anomala cuprea) | JN049867 | JF415967 | JN049885 | JF415991 | JF416009 |
| B. caledonica | ARSEF 2567 | Soil | - | AF339520 | HQ880889 | HQ880961 | EF469057 |
| Bionectria ochroleuca | AFTOL-ID187 | - | - | DQ862027 | - | DQ862013 | DQ862029 |
| B. vericulosa | HMAS 183151 | Plant | HM050304 | HM050302 | - | - | - |
| Blackwellomyces cardinalis | OSC 93609 | Lepidoptera; Tineidae (Larva) | - | AY184962 | DQ522370 | - | DQ522325 |
| B. cardinalis | OSC 93610 | Lepidoptera; Tineidae (Larva) | - | AY184963 | EF469088 | - | EF469059 |
| B. pseudomilitaris | NBRC 101409 | Lepidoptera (Larva) | - | JN941393 | JN992482 | - | - |
| B. pseudomilitaris | NBRC 101410 | Lepidoptera (Larva) | - | JN941394 | JN992481 | - | - |
| Calcarisporium arbuscula | CBS 221.73 | - | AY271809 | - | - | - | - |
| C. arbuscula | CBS 900.68 | Hymenomycetes (Agarics sp.) | KT945003 | KX442598 | - | KX442597 | KX442596 |
| C. cordycipiticola | CGMCC 3.17904 | Cordycipitaceae (Cordyceps militaris) | KT945001 | KX442604 | - | KX442607 | KX442605 |
| C. cordycipiticola | CGMCC 3.17905 | Cordycipitaceae (Cordyceps militaris) | KT944999 | KX442599 | - | KX442594 | KX442593 |
| C. xylariicola | HMAS 276836 | Xylariaceae (Xylaria sp.) | KX442603 | KX442601 | - | KX442606 | KX442595 |
| Calonectria ilicicola | CBS 190.50 | Plant | GQ280605 | GQ280727 | - | KM232307 | AY725726 |
| Cephalosporium curtipes | CBS 154.61 | Uredinales (Hemileia vastatrix) | AJ292404 | AF339548 | - | EF468947 | EF468802 |
| Claviceps fusiformis | ATCC 26019 | Poaceae | JN049817 | - | - | - | DQ522320 |
| Clonostachys rosea | GJS 90-227 | Plant | - | AY489716 | - | - | AY489611 |
| Cocoonihabitus sinensis | HMAS 254523 | Saturniidae (Cocoon) | KY924870 | KY924869 | - | - | - |
| C. sinensis | HMAS 254524 | Saturniidae (Cocoon) | MF687395 | MF687396 | - | - | - |
| Cordyceps amoene-rosea | CBS 107.73 | Coleoptera (Pupa) | MH860646 | MH872342 | MF416651 | - | - |
| C. bifusispora | EFCC 5690 | Lepidoptera (Pupa) | - | EF468806 | EF468854 | EF468909 | EF468746 |
| C. cateniannulata | CBS 152.83 | Coleoptera (Adult) | NR_111169 | NG_067333 | - | - | - |
| C. cateniobliqua | CBS 153.83 | Lepidoptera (Adoxophyesprivatana) | NR_111170 | - | - | - | JQ425688 |
| C. cf. farinosa | OSC 111004 | Lepidoptera (Pupa) | - | EF468840 | EF468886 | - | EF468780 |
| C. coleopterorum | CBS 110.73 | Coleoptera (Larva) | AY624177 | JF415988 | JN049903 | JF416006 | JF416028 |
| C. farinosa | CBS 111113 | - | - | MF416554 | MF416656 | MF416450 | MF416499 |
| C. fumosorosea | CBS 107.10 | - | - | MF416556 | MF416659 | MF416453 | MF416502 |
| C. militaris | OSC 93623 | Lepidoptera (Pupa) | - | AY184966 | DQ522377 | AY545732 | DQ522332 |
| Dactylonectria alcacerensis | CBS 129087 | Plant (Vitis vinifera) | JF735333 | KM231629 | - | - | JF735819 |
| Elaphocordyceps ophioglossoides | NBRC106332 | - | JN943322 | JN941409 | - | - | - |
| E. paradoxa | NBRC 106958 | - | JN943324 | JN941411 | - | - | - |
| Engyodontium aranearum | CBS 309.85 | Araneae (Spider) | - | AF339526 | DQ522387 | DQ522439 | DQ522341 |
| Epichloë typhina | ATCC 56429 | Poaceae (Festuca rubra) | JN049832 | U17396 | - | DQ522440 | AF543777 |
| Flammocladiella aceris | CPC 24422 | Plant (Acer platanoides) | KR611883 | KR611901 | - | - | - |
| Flavocillium bifurcatum | YFCC 6101 | Noctuidae (Larva) | - | MN576781 | MN576841 | MN576897 | MN576951 |
| Fusarium circinatum | CBS 405.97 | - | U61677 | - | - | JX171623 | KM231943 |
| F. subluratum | CBS 189.34 | Soil | HQ897830 | KM231680 | - | - | - |
| Gelasinospora tetrasperma | AFTOL-ID 1287 | - | - | DQ470980 | - | DQ470932 | DQ471103 |
| Gibellula longispora | NHJ 12014 | Araneae (Spider) | - | - | EU369055 | - | EU369017 |
| G. pulchra | NHJ 10808 | Araneae (Spider) | - | EU369035 | EU369056 | - | EU369018 |
| G. ratticaudata | ARSEF 1915 | Araneae (Spider) | - | DQ518777 | DQ522408 | - | DQ522360 |
| Haptocillium sinense | CBS 567.95 | Nematode | AJ292417 | AF339545 | - | - | - |
| Harposporium harposporiferum | ARSEF 5472 | - | - | NG_060621 | - | - | - |
| Hevansia arachnophile | NHJ 10469 | Araneae (Spider) | - | EU369031 | EU369047 | - | EU369008 |
| H. cinerea | NHJ 3510 | Araneae (Spider) | - | - | EU369048 | - | EU369009 |
| H. nelumboides | BCC 41864 | Araneae (Spider) | JN201871 | JN201873 | - | - | JN201867 |
| H. novoguineensis | NHJ 11923 | Araneae (Spider) | - | EU369032 | EU369052 | - | EU369013 |
| Hyperdermium pulvinatum | P.C. 602 | Hemiptera (Scale insect) | - | DQ118738 | DQ127237 | - | DQ118746 |
| Hydropisphaera erubescens | ATCC 36093 | - | - | AF193230 | - | AY545731 | DQ518174 |
| H. peziza | GJS 92-101 | Plant (Bark) | - | AY489730 | - | - | AY489625 |
| Hypocrea americana | AFTOL-ID 52 | - | DQ491488 | AY544649 | - | - | DQ471043 |
| H. lutea | ATCC 208838 | On decorticated conifer wood | - | AF543791 | - | DQ522446 | AF543781 |
| H. rufa | DAOM JBT1003 | - | JN942883 | JN938865 | |||
| H. discoidea | BCC 8237 | - | JN049840 | DQ384937 | - | DQ452461 | DQ384977 |
| Hypomyces polyporinus | ATCC 76479 | - | - | AF543793 | - | - | AF543784 |
| Isaria farinosa | CEP 004 | Soil | JN998783 | - | - | - | JN998763 |
| I. farinosa | CEP 005 | Soil | JN998784 | - | - | - | JN998764 |
| I. farinosa | CEP 029 | Trialeurodes vaporariorum | JN998785 | - | - | - | JN998765 |
| I. farinosa | OSC 111005 | Lepidoptera (Pupa) | - | DQ518772 | DQ522394 | - | DQ522348 |
| I. farinosa | OSC 111006 | Lepidoptera (Pupa) | - | EF469080 | EF469094 | - | EF469065 |
| I. farinosa | OSC 111007 | Lepidoptera (Pupa) | - | DQ518773 | DQ522395 | DQ522449 | DQ522349 |
| Lecanicillium antillanum | CBS 350.85 | Hymenomycetes (Agaric sp.) | - | AF339536 | DQ522396 | DQ522450 | DQ522350 |
| L. attenuatum | CBS 402.78 | Leaf litter of Acer saccharum | - | AF339565 | EF468888 | EF468935 | EF468782 |
| L. aranearum | CBS 726.73a | Arachnida (Spider) | - | AF339537 | EF468887 | EF468934 | EF468781 |
| L. fusisporum | CBS 164.70 | Hymenomycetes (Coltricia perennis) | - | AF339549 | EF468889 | - | EF468783 |
| L. psalliotae | CBS 367.86 | Puccinia graminis | - | KM283800 | - | - | KM283823 |
| L. lecanii | CBS101247 | Hemiptera (Coccus viridis) | JN049836 | KM283794 | - | KM283859 | DQ522359 |
| Leptobacillium chinense | LC 1345 | submerged wood | - | JQ410322 | - | - | - |
| L. coffeanum | CDA 734 | Plant (Coffea arabica) | - | MF066032 | - | - | - |
| Liangia sinensis | YFCC 3103 | Fungi (Beauveria yunnanensis) | - | MN576782 | MN576842 | MN576898 | MN576952 |
| L. sinensis | YFCC 3104 | Fungi (Beauveria yunnanensis) | - | MN576783 | MN576843 | MN576899 | MN576953 |
| Metapochonia goniodes | CBS 891.72 | Fungi | AJ292409 | AF339550 | DQ522401 | DQ522458 | DQ522354 |
| Myrotheciomyces corymbiae | CPC 33206 | Plant (Corymbia variegata) | NR_160351 | NG_064542 | - | - | - |
| Myrothecium inundatum | IMI 158855 | Hymenomycetes (Russula nigricans) | - | AY489731 | - | - | AY489626 |
| M. roridum | ATCC 16297 | Soil | - | AY489708 | - | - | AY489603 |
| M. verrucaria | ATCC 9095 | Plant (Gossypium sp.) | - | AY489713 | - | - | AY489608 |
| Nectira cinnabarina | CBS 125165 | Plant (Aesculus sp.) | HM484548 | HM484562 | - | KM232402 | HM484527 |
| N. nigrescens | CBS 125148 | Plant (Dicotyledonous tree) | HM484707 | HM484720 | - | KM232403 | HM484672 |
| Nectriopsis violacea | CBS 424.64 | Fungi (Fuligo sp.) | - | AY489719 | - | - | - |
| Neobarya parasitica | Marson s/n | Fungi (Bertia moriformis) | KP899626 | KP899626 | - | - | - |
| Neonectria candida | CBS 151.29 | Plant (Malus sylvestris) | JF735313 | AY677333 | - | - | JF735791 |
| N. faginata | CBS 217.67 | - | HQ840385 | HQ840382 | - | DQ789797 | JF268746 |
| N. neomacrispora | CBS 118984 | - | HQ840388 | HQ840379 | - | DQ789810 | JF268754 |
| N. ramulariae | CBS 182.36 | - | HM054157 | HM042435 | - | DQ789793 | HM054092 |
| Neurospora crassa | ICMP 6360 | - | AY681193 | AY681158 | - | - | - |
| Niesslia exilis | CBS 560.74 | - | - | AY489720 | - | - | AY489614 |
| Ophiocordyceps heteropoda | EFCC 10125 | Cicadidae (Tibicen bihamatus) | JN049852 | EF468812 | - | EF468914 | EF468752 |
| O. sinensis | EFCC 7287 | Lepidoptera (Ghostmoth) | JN049854 | EF468827 | - | EF468924 | EF468767 |
| O. stylophor | OSC 111000 | Insect (Larvae) | JN049828 | DQ518766 | - | DQ522433 | DQ522337 |
| Peethambara spirostriata | CBS 110115 | Plant (Theobroma cacao) | - | AY489724 | - | EF692516 | AY489619 |
| Purpureocillium lilacinum | CBS 284.36 | Soil | - | AY624227 | EF468898 | EF468941 | EF468792 |
| P. lilacinum | CBS 431.87 | Nematoda (Meloidogyne sp.) | HQ842812 | EF468844 | EF468897 | EF468940 | EF468791 |
| Rosasphaeria moravica | LMM | - | JF440985 | - | - | JF440986 | JF440987 |
| Roumegueriella rufula | GJS 91-64 | - | - | EF469082 | - | EF469116 | EF469070 |
| R. rufula | CBS 346.85 | - | - | DQ518776 | - | DQ522461 | DQ522355 |
| Samsoniella alboaurantium | CBS 240.32 | Lepidoptera (Pupa) | - | JF415979 | JN049895 | JF415999 | JF416019 |
| S. alboaurantium | CBS 262.58 | Soil | - | AB080087 | MF416654 | MF416448 | MF416497 |
| S. alpina | YFCC 5818 | Hepialidae (Hepialus baimaensis) | - | MN576809 | MN576869 | MN576923 | MN576979 |
| S. alpina | YFCC 5831 | Hepialidae (Hepialus baimaensis) | - | MN576810 | MN576870 | MN576924 | MN576980 |
| S. antleroides | YFCC 6016 | Noctuidae (Larvae) | - | MN576803 | MN576863 | MN576917 | MN576973 |
| S. antleroides | YFCC 6113 | Noctuidae (Larvae) | - | MN576804 | MN576864 | MN576918 | MN576974 |
| S. aurantia | TBRC 7271 | Lepidoptera | - | MF140728 | MF140791 | MF140818 | MF140846 |
| S. aurantia | TBRC 7272 | Lepidoptera | - | MF140727 | - | MF140817 | MF140845 |
| S. aurantia | DY10951 | Lepidoptera (Pupa) | MZ827667 | MZ827827 | - | - | MZ855229 |
| S. aurantia | DY10952 | Lepidoptera (Pupa) | MZ827666 | MZ827084 | - | - | MZ855230 |
| S. cardinalis | YFCC 5830 | Limacodidae (Pupa) | - | MN576788 | MN576848 | MN576902 | MN576958 |
| S. cardinalis | YFCC 6144 | Limacodidae (Pupa) | - | MN576786 | MN576846 | MN576900 | MN576956 |
| S. coleopterorum | A19501 | Curculionidae (Snout beetle) | MT626376 | - | MT642600 | MN101585 | MN101586 |
| S. coleopterorum | A19502 | Curculionidae (Snout beetle) | MT626625 | - | MT642603 | MN101587 | MT642602 |
| S. cristata | YFCC 6021 | Saturniidae (Pupa) | - | MN576791 | MN576851 | MN576905 | MN576961 |
| S. cristata | YFCC 6023 | Saturniidae (Pupa) | - | MN576792 | MN576852 | MN576906 | MN576962 |
| S. hepiali | ICMM 82-2 | Fungi (Ophiocordyceps sinensis) | - | MN576794 | MN576854 | MN576908 | MN576964 |
| S. hepiali | ICMM Cs-4 | Fungi (Ophiocordycepssinensis) | - | MN576799 | MN576859 | MN576913 | MN576969 |
| S. hepiali | YFCC 661 | Fungi (Ophiocordycepssinensis) | - | MN576795 | MN576855 | MN576909 | MN576965 |
| S. hepiali | YJ06171 | Formicidae | MZ831866 | MZ831868 | MZ855241 | - | MZ855235 |
| S. hepiali | YJ06172 | Formicidae | MZ831867 | MZ831873 | - | - | MZ855236 |
| S. hymenopterorum | A19521 | Vespidae (Bee) | MN128224 | - | MT642601 | MT642604 | MN101588 |
| S. hymenopterorum | A19522 | Vespidae (Bee) | MN128081 | - | MN101589 | MN101590 | MN101591 |
| S. inthanonensis | TBRC 7915 | Lepidoptera (Pupa) | MF140761 | - | MF140790 | MF140815 | MF140849 |
| S. inthanonensis | TBRC 7916 | Lepidoptera (Pupa) | MF140760 | - | MF140789 | MF140814 | MF140848 |
| S. kunmingensis | YHH 16002 | Lepidoptera (Pupa) | - | MN576802 | MN576862 | MN576916 | MN576972 |
| S. lanmaoa | YFCC 6148 | Lepidoptera (Pupa) | - | MN576789 | MN576849 | MN576903 | MN576959 |
| S. lanmaoa | YFCC 6193 | Lepidoptera (Pupa) | - | MN576790 | MN576850 | MN576904 | MN576960 |
| S. lepidopterorum | DL10071 | Lepidoptera (Pupa) | MN128076 | - | MN101592 | MN101593 | MN101594 |
| S. lepidopterorum | DL10072 | Lepidoptera (Pupa) | MN128084 | - | - | MT642605 | MT642606 |
| S. pseudogunii | GY407201 | Lepidoptera (Larvae) | MZ827470 | MZ827010 | - | MZ855239 | MZ855233 |
| S. pseudogunii | GY407202 | Lepidoptera (Larvae) | MZ831863 | MZ831865 | - | MZ855240 | MZ855234 |
| S. pupicola | DY101681 | Lepidoptera (Pupa) | MZ827085 | MZ827009 | - | MZ855237 | MZ855231 |
| S. pupicola | DY101682 | Lepidoptera (Pupa) | MZ827008 | MZ827635 | - | MZ855238 | MZ855232 |
| S. ramose | YFCC 6020 | Limacodidae (Pupa) | - | MN576805 | MN576865 | MN576919 | MN576975 |
| S. tortricidae | YFCC 6013 | Limacodidae (Pupa) | - | MN576807 | MN576867 | MN576921 | MN576977 |
| S. tortricidae | YFCC 6131 | Limacodidae (Pupa) | - | MN576806 | MN576866 | MN576920 | MN576976 |
| S. yunnanensis | YFCC 1527 | Limacodidae (Pupa) | - | MN576812 | MN576872 | MN576926 | MN576982 |
| S. yunnanensis | YFCC 1824 | Limacodidae (Pupa) | - | MN576813 | MN576873 | MN576927 | MN576983 |
| Sarocladium bacillisporum | CBS 425.67 | Soil | NR_145039 | MH870718 | - | - | - |
| S. dejongiae | CBS 144929 | Soil | NR_161153 | NG_067854 | - | - | - |
| S. implicatum | CBS 959.72 | Soil | HG965023 | MH878470 | - | - | - |
| S. subulatum | CBS 217.35 | Soil | MH855652 | NG_070566 | - | - | - |
| S. terricola | CBS 243.59 | Soil | MH857853 | MH869389 | - | - | - |
| Shimizuomyces paradoxus | EFCC 6279 | Smilacaceae (Smilax sieboldii) | JN049847 | EF469084 | - | EF469117 | EF469071 |
| Simplicillium lamellicola | CBS 116.25 | Hymenomycetes (Agaricus bisporus) | AJ292393 | MH866307 | - | DQ522462 | DQ522356 |
| S. lanosoniveum | CBS 101267 | Uredinales (Hemileia vastatrix) | - | AJ292395 | - | DQ522463 | DQ522357 |
| S. lanosoniveum | CBS 704.86 | Uredinales (Hemileia vastatrix) | AJ292396 | AF339553 | - | DQ522464 | DQ522358 |
| Sordaria fimicola | AFTOL-ID 216 | - | DQ518178 | - | - | - | DQ518175 |
| Sphaerostilbella aureonitens | GJS74-87 | - | FJ442633 | HM466683 | - | FJ442763 | - |
| S. berkeleyana | GJS82-274 | - | - | U00756 | - | - | AF543783 |
| Stachybotrys chlorohalonata | DAOM 235557 | - | JN942888 | JN938870 | - | - | - |
| S. eucylindrospora | ATCC 18851 | - | JN942887 | JN938869 | - | - | - |
| Stephanonectria keithii | GJS92-133 | Plant (Bark) | - | AY489727 | - | - | AY489622 |
| Tilachlidium brachiatum | CBS 363.97 | Hymenomycetes (Agaricus sp.) | KM231838 | KM231719 | - | KM232414 | KM231975 |
| T. brachiatum | CBS 506.67 | Hymenomycetes (Hypholoma fasciculare) | KM231839 | HQ232177 | - | KM232415 | KM231976 |
| Tolypocladium inflatum | SCALT1007-002 | Sclerotium | KC963032 | - | - | - | - |
| Trichoderma aggresivum | CBS 100525 | - | - | JN939837 | - | JQ014130 | - |
| T. viride | GJS89-127 | Plant (Bark) | - | AY489726 | - | - | AY489621 |
| Trichothecium roseum | DUCC 502 | Plant (Solanum lycopersicum) | JN937590 | JX458860 | - | - | - |
| Valetoniellopsis laxa | GJS 96-174 | - | - | AY015635 | - | AY015638 | - |