Å	Angstrom
AGC-kinase	group of kinases related to PKA PKG and PKC
AMPK	adenosine monophosphate-activated protein kinase
ATP	adenosine triphosphate
CAK	CDK-activating kinase
CC	cyclin C
CDK	Cyclin-dependent kinase
CDKI	cyclin-dependent protein inhibitor
Cryo-EM	Cryogenic electron microscopy
EGOC	Gtr1, Gtr2, Ego1, and Ego3 complex that can activate TORC1
ERK5	extracellular signal-regulated kinase 5
GTP	guanosine triphosphate
HDAC	Rpd3–Sin3–Ume6 histone deacetylase
HOG	high osmolarity glycerol
IDR	intrinsic disordered region
IMM	inner mitochondrial membrane
MAPK	mitogen-activated protein kinase
MAPK	mitogen-activated protein kinase kinase
MAPKKK	mitogen-activated protein kinase kinase kinase
MEFs	mouse embryonic fibroblasts
MFF	mitochondrial fission factor
MOMP	mitochondrial outer membrane permeabilization
mtDNA	mitochondrial DNA
NPC	nuclear pore complex
OMM	outer mitochondrial membrane
OXPHOS	oxidative phosphorylation
PAS	pre-autophagosomal structure
PIC	pre-initiation complex
Pkc1	protein kinase C
PKA	protein kinase A
RNA Pol II	RNA Polymerase II
ROS	reactive oxygen species
SAA	Snx4-assisted autophagy
SCF	Skp1-Cullin-F-box E3 ligase complex
SRG’s	stress response genes
SEACIT	Sea1–Npr2–Npr3 complex that can inhibit TORC1
Ser	serine
TORC1	target of rapamycin kinase complex 1
Thr	threonine
TF	Transcription factor
UAS	upstream activating sequences
UPS	ubiquitin proteasome system
YFP	yellow fluorescence protein