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. 2021 Sep 29;13(10):1962. doi: 10.3390/v13101962

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© 2021 by the authors.

Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).

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Evidence of recombination in BtCoV HKU10s. Similarity (A) (window of 40 nt, step size of 40 nt) and recombination (B) (window of 1500 nt, step size of 150 nt) plots were generated using Simplot (V3.5.1) with default settings. Full-length genome sequence of YN3723 was used as query sequence and YN3740, YN4996 and YN7345 as reference sequences. All analyses were performed with Kimura model, a window size of 1500 base pairs, and a step size of 150 base pairs. The map of query genome sequences (C) are used to position breakpoints.