Table 1.
SSR Locus | Na | Allele Range | Rare Alleles |
PIC | Ho | He | Fis | HW |
---|---|---|---|---|---|---|---|---|
BPPCT034 | 15 | 214–258 | 6 # & ## | 0.786 | 0.95 | 0.81 | −0.17 | *** |
BPPCT037 | 10 | 127–170 | 2 # | 0.799 | 0.85 | 0.82 | −0.04 | NS |
CPPCT006 | 12 | 173–203 | 4 # | 0.750 | 0.78 | 0.78 | 0 | NS |
CPPCT022 | 9 | 245–259 | 2 # & ## | 0.626 | 0.64 | 0.68 | 0.06 | NS |
CPSCT038 | 6 | 184–203 | 1 # | 0.570 | 0.63 | 0.63 | 0 | NS |
EMPa002 | 5 | 105–131 | 3 ## | 0.363 | 0.55 | 0.46 | −0.2 | NS |
EMPa004 | 11 | 160–212 | 6 # & ## | 0.678 | 0.73 | 0.73 | 0 | NS |
EMPa017 | 9 | 229–246 | 5 # & ## | 0.358 | 0.35 | 0.38 | 0.08 | NS |
EMPa018 | 14 | 82–119 | 8 # & ## | 0.640 | 0.61 | 0.68 | 0.1 | NS |
EMPaS02 | 8 | 134–152 | 1 | 0.775 | 0.77 | 0.8 | 0.04 | NS |
EMPaS06 | 12 | 203–229 | 4 # | 0.838 | 0.85 | 0.85 | 0 | NS |
EMPaS12 | 10 | 112–155 | 5 # & ## | 0.733 | 0.79 | 0.77 | −0.03 | NS |
EMPaS14 | 7 | 168–213 | 3 # & ## | 0.558 | 0.65 | 0.63 | −0.03 | NS |
PAV-Rf-SSR | 9 | 343–363 | 3 # | 0.737 | 0.78 | 0.77 | −0.01 | NS |
Total | 137 | |||||||
Mean | 9.8 | 0.658 | 0.71 | 0.70 | −0.01 |
Na: number of alleles per locus; Private alleles: # occurring only in one accession; ## occurring only in one collection PIC: polymorphism information content, Ho: observed heterozygosity, He: expected heterozygosity, Fis: inbreeding coefficient, HW: significance of deviation from Hardy–Weinberg equilibrium: NS = not significant, ***: significant at the 0.1% level.