FIG 2.
Dendrograms constructed from the Fst between populations from Cuba (CU), the Dominican Republic (DR), and Honduras (HN) calculated from all SNPs along the genome (A) and SNPs within genomic regions having more evidence supporting selection footprints (classes I and II, Table 3) detected in Cuba (B) or in the Dominican Republic (C). R, resistant host; S, susceptible host. Each sample name indicates its country of origin (DR, CU, or HN), the code of the location of origin within countries (numbered 1, 2, or 3; Table 1 gives correspondences), and the code of the cultivar of origin (S1, susceptible cultivars ‘Macho’; S2, susceptible cultivars ‘Macho 3/4’; S3, susceptible cultivars ‘Grande Naine’; S4, susceptible cultivars ‘French sombre’; R1, resistant cultivars ‘FHIA21’; R2, resistant cultivars ‘FHIA18’).