TABLE 1.
sRNAs with a ≥2-fold change in each comparison
USA300 no. | Name | 34°C expression valuea | 37°C expression valuea | 40°C expression valuea | Ratio 34°C/37°C | Ratio 37°C/40°C | Ratio 34°C/40°C |
---|---|---|---|---|---|---|---|
SAUSA300s031 | sprD | 167.73 | 31.73 | 3.88 | 5.29 | 8.18 | 43.23 |
SAUSA300s050 | RsaD | 5,359.55 | 2,090.61 | 86.34 | 2.56 | 24.21 | 62.07 |
SAUSA300s056 | RsaK | 159.26 | 31.86 | 14.36 | 5.00 | 2.22 | 11.09 |
SAUSA300s089 | Teg49 | 915.4 | 87.65 | 8.88 | 10.44 | 9.87 | 103.09 |
SAUSA300s104 | Teg141 | 73.05 | 27.92 | 8.87 | 2.62 | 3.15 | 8.24 |
SAUSA300s148 | Teg23 | 3,776.04 | 1,670.10 | 543.96 | 2.26 | 3.07 | 6.94 |
SAUSA300s153 | Teg16 | 1,059.05 | 248.94 | 60.67 | 4.25 | 4.10 | 17.46 |
SAUSA300s171 | Sau-6569 | 115.92 | 48.8 | 16.85 | 2.38 | 2.90 | 6.88 |
SAUSA300s220 | sRNA140 | 43.13 | 18.32 | 1.54 | 2.35 | 11.90 | 28.01 |
SAUSA300s227 | sRNA178 | 429.91 | 215.46 | 98.35 | 2.00 | 2.19 | 4.37 |
SAUSA300s233 | sRNA205 | 210.64 | 85.17 | 25.82 | 2.47 | 3.30 | 8.16 |
SAUSA300s239 | sRNA260 | 31.39 | 10.54 | 1.2 | 2.98 | 8.78 | 26.16 |
SAUSA300s261 | sRNA397 | 79.21 | 33.24 | 8.48 | 2.38 | 3.92 | 9.34 |
SAUSA300s274 | tsr10 | 65.87 | 26.26 | 8.6 | 2.51 | 3.05 | 7.66 |
SAUSA300s282 | tsr18 | 519.56 | 254.9 | 16.71 | 2.04 | 15.25 | 31.09 |
Average expression value in RPKM (reads per kilobase per million mapped reads).