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. 2021 Sep 14;6(5):e00630-21. doi: 10.1128/mSystems.00630-21

TABLE 2.

Topological properties of empirical molecular ecological networks in comparison to random networks

Sampling time and group Total no. of nodes Empirical networksa
Random networksa,b
Total no. of links No. of positive links avgK avgCC GD Modularity Nodes with maximum stress centrality Nodes with maximum eigenvector centrality Nodes with maximum betweenness avgCC GD
45 days
    Control 232 564 408 4.862 0.382 8.274 0.766 OTU_115 OTU_12 OTU_115 0.056 ± 0.009 3.419 ± 0.044
    Exposure 257 643 486 5.004 0.283 4.311 0.690 OTU_2 OTU_5 OTU_2 0.691 ± 0.008 1.526 ± 0.002
    Recovery 179 311 255 3.475 0.285 6.335 0.740 OTU_59 OTU_3 OTU_59 0.033 ± 0.010 3.856 ± 0.083
75 days
    Control 167 1,236 766 12.026 0.526 3.442 0.479 OTU_109 OTU_87 OTU_109 0.155 ± 0.010 2.748 ± 0.026
    Exposure 304 1,828 1,681 14.802 0.471 4.896 0.174 OTU_145 OTU_131
OTU_323
OTU_123 0.227 ± 0.010 2.413 ± 0.026
    Recovery 146 1,704 1,584 23.342 0.613 2.161 0.411 OTU_96 OTU_24 OTU_96 0.523 ± 0.015 2.166 ± 0.025
a

avgK, average connectivity; avgCC, average clustering coefficient; GD, average path distance.

b

Values are the mean ± standard deviation generated from networks randomly rewired 100 times.