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. Author manuscript; available in PMC: 2021 Oct 26.
Published in final edited form as: Cell Rep. 2021 Sep 7;36(10):109676. doi: 10.1016/j.celrep.2021.109676

Table 1.

Light controls alternative splicing of a core set of splicing-related factors

Name Locus Description
ADF11 AT1G01750 actin depolymerizing factor 11
At-SR30 AT1G09140 encodes a serine-arginine-rich RNA binding protein involved in regulation of splicing (including splicing of itself)
ALY3, IRP8 AT1G66260 involved in rRNA processing 8, RNA-binding (RRM/RBD/RNP motifs) family protein
AMY3 AT1G69830 α-amylase-like 3, encodes a plastid-localized α-amylase.
- AT1G72500 inter-α-trypsin inhibitor, heavy chain-like protein
ATMYO5, ATXIF, MYOSIN 5 AT2G31900 encodes a novel myosin isoform
- AT2G36320 A20/AN1-like zinc finger family protein
ATNCER2 AT2G38010 neutral ceramidase 2, neutral/alkaline non-lysosomal ceramidase
PRP43b AT2G47250 RNA helicase family protein
ATMS2 AT3G03780 encodes a cytosolic methionine synthase, involved in methionine regeneration via the activated methyl cycle (or SAM cycle)
- AT3G06530 armadillo (ARM) repeat superfamily protein, U3 small nucleolar RNA-associated protein
SR34a AT3G49430 Serine/arginine-rich protein splicing factor 34A
At-RS31 AT3G61860 encodes an arginine/serine-rich splicing factor
- AT4G35785 RNA-binding (RRM/RBD/RNP motifs) family protein
At-U2AF65A AT4G36690 U2 small nuclear ribonucleoprotein auxiliary factor U2AF subunit
AtUAP56–2 AT5G11170 homolog of human UAP56 A, UAP56A, encoding an ATP-dependent RNA helicase that localizes predominantly to euchromatic regions
At-RS41 AT5G52040 Encodes an arginine/serine-rich splicing factor
LIP1 AT5G64813 the light-insensitive period1 (LIP1) gene encodes a small GTPase that influences the light input pathway of the plant circadian network