Table 1.
Light controls alternative splicing of a core set of splicing-related factors
Name | Locus | Description |
---|---|---|
ADF11 | AT1G01750 | actin depolymerizing factor 11 |
At-SR30 | AT1G09140 | encodes a serine-arginine-rich RNA binding protein involved in regulation of splicing (including splicing of itself) |
ALY3, IRP8 | AT1G66260 | involved in rRNA processing 8, RNA-binding (RRM/RBD/RNP motifs) family protein |
AMY3 | AT1G69830 | α-amylase-like 3, encodes a plastid-localized α-amylase. |
- | AT1G72500 | inter-α-trypsin inhibitor, heavy chain-like protein |
ATMYO5, ATXIF, MYOSIN 5 | AT2G31900 | encodes a novel myosin isoform |
- | AT2G36320 | A20/AN1-like zinc finger family protein |
ATNCER2 | AT2G38010 | neutral ceramidase 2, neutral/alkaline non-lysosomal ceramidase |
PRP43b | AT2G47250 | RNA helicase family protein |
ATMS2 | AT3G03780 | encodes a cytosolic methionine synthase, involved in methionine regeneration via the activated methyl cycle (or SAM cycle) |
- | AT3G06530 | armadillo (ARM) repeat superfamily protein, U3 small nucleolar RNA-associated protein |
SR34a | AT3G49430 | Serine/arginine-rich protein splicing factor 34A |
At-RS31 | AT3G61860 | encodes an arginine/serine-rich splicing factor |
- | AT4G35785 | RNA-binding (RRM/RBD/RNP motifs) family protein |
At-U2AF65A | AT4G36690 | U2 small nuclear ribonucleoprotein auxiliary factor U2AF subunit |
AtUAP56–2 | AT5G11170 | homolog of human UAP56 A, UAP56A, encoding an ATP-dependent RNA helicase that localizes predominantly to euchromatic regions |
At-RS41 | AT5G52040 | Encodes an arginine/serine-rich splicing factor |
LIP1 | AT5G64813 | the light-insensitive period1 (LIP1) gene encodes a small GTPase that influences the light input pathway of the plant circadian network |