Table 3.
MAGs produced with HiSeq and hybrid assembly with > 50% completeness and < 10% contamination. MAG parameters were determined with CheckM. Metaerg taxonomy is determined via predicted ORFs that inherited their taxonomy from GTDB. Taxonomy is determined to the species level if coding sequences align to one species > 50%.
| Assembly type | MAG ID | Genome size (bp) | Longest contig (bp) | Mean contig length (bp) | N50 | Completeness (%) | Contamination (%) | Closest Metaerg GTDB-based taxonomy |
|---|---|---|---|---|---|---|---|---|
| HiSeq | HiSeq_31 | 3,218,255 | 51,014 | 7926 | 9977 | 90.6 | 1.7 | Octadecabacter arcticus |
| HiSeq_14 | 3,193,410 | 34, 424 | 5592 | 7860 | 80.2 | 3.4 | Polaromonas sp. JS666 | |
| HiSeq_32 | 2,854,964 | 29,037 | 6781 | 3796 | 77.3 | 0.6 | Pseudomonas sp. | |
| HiSeq_30 | 1,577,574 | 14,969 | 4612 | 5723 | 52.1 | 1.7 | Nonlabens marinus | |
| HiSeq_8 | 1,930,594 | 28,420 | 5274 | 4775 | 51.7 | 3.4 | Flavobacterium sp. | |
| HiSeq_19 | 1,677,201 | 32,650 | 5392 | 5599 | 51.3 | 1.7 | Nonlabens sp. | |
| Hybrid | Hybrid_5 | 3,275,525 | 122,374 | 14,557 | 19,997 | 90.9 | 0.6 | Octadecabacter arcticus |
| Hybrid_20 | 3,024,995 | 47,365 | 9166 | 11,848 | 84.2 | 1.0 | Pseudomonas sp. | |
| Hybrid_35 | 3,189,002 | 54,478 | 8032 | 10,334 | 79.5 | 1.4 | Polaromonas sp. JS666 | |
| Hybrid_12 | 1,885,346 | 36,215 | 7141 | 11,449 | 64.0 | 1.6 | Nonlabens marinus | |
| Hybrid_27 | 1,821,856 | 32,650 | 6093 | 19,324 | 56.3 | 0.6 | Nonlabens sp. | |
| Hybrid_21 | 2,613,398 | 43,486 | 8799 | 6309 | 50.8 | 0.8 | Flavobacterium sp. |