Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2021 Oct 26;11:21108. doi: 10.1038/s41598-021-00267-w

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© The Author(s) 2021

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

PMC Copyright notice

Phylogenetic tree (December 2019 to April 2020) revealing similarities of West-African viral sequences with Chinese and multiple European countries. (a) Nigerian samples cluster with the early Chinese samples within the bottom branch of the tree, Ghanaian samples are about equally distributed between the top (European) and bottom branch of the tree. Senegalese samples cluster closer with the French reference sample on the top of the tree. (b) Highest diversity is at the A23403G (D614G) substitution splitting the tree in the bottom (Chinese) and top (European) branch. This variant has been reported to increase infectivity^1,12. Graphics were generated using the nextstrain pipeline including software Augur (version 7.0.2, https://docs.nextstrain.org/projects/augur/en/stable/index.html) and TreeTime (version 0.7.6, https://github.com/neherlab/treetime)^28,31.