Skip to main content
. 2021 Aug 24;7(8):000644. doi: 10.1099/mgen.0.000644

Fig. 1.

Fig. 1.

(a) Binary heatmap of antimicrobial resistance genes (ARGs) and chromosomal mutations present in four Shigella strains identified by ResFinder-3.2; S. sonnei (598 080, 607 387 and 893 916) and S. flexneri 3a (888048). Where a gene is present (at a threshold of >98 % identity and >99 % query coverage), the tile is coloured by the antimicrobial class it confers resistance to. The gene sat-2 is not included in the ResFinder database but is included in this figure and chromosomal mutations in quinolone resistance determining region (QRDR) genes gyrA and parC are shown on the right. Known mobile genetic elements in Shigella are denoted above, as previously defined by Baker et al. [8]. (b) Phenotypic resistance profiles of the four isolates to antimicrobial classes. R=Resistant, S=Susceptible, I=Intermediate.